DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VRVHND
Uniprot ID:
Q8NEC7
Source protein:
Glutathione S-transferase C-terminal domain-containing protein
Source gene:
GSTCD
Class:
LIG_APCC_ABBA_1
Location:
187:192
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9964
ASA_SCORE:
86.1
COIL:
0.7342
CONS_SCORE:
0.4756
DSS_SCORE:
0.5605
HELIX:
0.2027
FCONS_SCORE:
1.1126
RIG_SCORE:
0.7383
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L183R
TCGA-A5-A2K5
UCEC
TCGA
VRVHND
LIG_APCC_ABBA_1
0.2222
p.L183R
DO41379
UCEC
ICGC
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196C
TCGA-AJ-A3BG
UCEC
TCGA
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196C
DO42633
UCEC
ICGC
VRVHND
LIG_APCC_ABBA_1
0.2222
p.N191T
TCGA-AN-A046
BRCA
TCGA
VRVHND
LIG_APCC_ABBA_1
0.5944
p.N191T
DO1285
BRCA
ICGC
VRVHND
LIG_APCC_ABBA_1
0.5944
p.E180D
TCGA-AX-A05Z
UCEC
TCGA
VRVHND
LIG_APCC_ABBA_1
0.1389
p.E180D
DO40884
UCEC
ICGC
VRVHND
LIG_APCC_ABBA_1
0.1389
p.K199R
TCGA-B5-A1MX
UCEC
TCGA
VRVHND
LIG_APCC_ABBA_1
0.25
p.K199R
DO41999
UCEC
ICGC
VRVHND
LIG_APCC_ABBA_1
0.25
p.E185K
TCGA-DU-6392
LGG
TCGA
VRVHND
LIG_APCC_ABBA_1
0.2778
p.E185K
TCGA-EK-A3GM
CESC
TCGA
VRVHND
LIG_APCC_ABBA_1
0.2778
p.E185K
DO49966
CESC
ICGC
VRVHND
LIG_APCC_ABBA_1
0.2778
p.E185K
DO22237
LGG
ICGC
VRVHND
LIG_APCC_ABBA_1
0.2778
p.P186S
DO230326
COCA
ICGC
VRVHND
LIG_APCC_ABBA_1
0.3056
p.V187A
DO222798
COCA
ICGC
VRVHND
LIG_APCC_ABBA_1
0.6936
p.D192H
SIDM00875
Breast Carcinoma
GDSC
VRVHND
LIG_APCC_ABBA_1
0.7688
p.D192H
ACH-000624
Breast Cancer
CCLE
VRVHND
LIG_APCC_ABBA_1
0.7688
p.D192H
HCC1806
breast
COSMIC
VRVHND
LIG_APCC_ABBA_1
0.7688
p.R196H
SIDM00554
Ovarian Carcinoma
GDSC
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196H
ACH-000524
Ovarian Cancer
CCLE
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196H
KURAMOCHI
ovary
COSMIC
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196S
SIDM00991
T-Lymphoblastic Leukemia
GDSC
VRVHND
LIG_APCC_ABBA_1
0.2222
p.R196S
ACH-000519
Leukemia
CCLE
VRVHND
LIG_APCC_ABBA_1
0.2222
p.S184I
ACH-002038
Ovarian Cancer
CCLE
VRVHND
LIG_APCC_ABBA_1
0.6944
p.A199T
23132-87
stomach
COSMIC
VRVHND
LIG_APCC_ABBA_1
0.25
Drug responses associated with GSTCD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVHND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEC7
Glutathione S-transferase C-terminal domain-containing protein
LIG_APCC_ABBA_1
187:192
VRVHND
APC,CDC20,FZR1
0.9964
More...