DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVRLPRVG
Uniprot ID:
Q9BXM0
Source protein:
Periaxin
Source gene:
PRX
Class:
DEG_APCC_DBOX_1
Location:
1374:1382
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8967
ASA_SCORE:
69.7667
COIL:
0.6343
CONS_SCORE:
0.8592
DSS_SCORE:
0.5576
HELIX:
0.0164
FCONS_SCORE:
1.0018
RIG_SCORE:
0.7271
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1375L
TCGA-D3-A2JL
SKCM
TCGA
VRVRLPRVG
DEG_APCC_DBOX_1
0.8428
p.R1375L
DO47278
SKCM
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.8428
p.A1385T
TCGA-E6-A2P9
UCEC
TCGA
VRVRLPRVG
DEG_APCC_DBOX_1
0.25
p.A1385T
DO43714
UCEC
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.25
p.R1371W
TCGA-ER-A19P
SKCM
TCGA
VRVRLPRVG
DEG_APCC_DBOX_1
0.25
p.R1371W
DO34600
PACA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.25
p.R1371W
DO47623
SKCM
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.25
p.R1391Q
TCGA-FU-A3HZ
CESC
TCGA
VRVRLPRVG
DEG_APCC_DBOX_1
0.0833
p.R1391Q
DO6308
CESC
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.0833
p.R1373Q
DO222436
BTCA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.R1373Q
DO229376
BTCA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.R1373Q
DO233712
GACA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.R1370H
DO234366
ESAD
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370H
DO233882
GACA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1380C
DO233869
GACA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.719
p.R1377C
DO229036
LICA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.719
p.S1387F
DO220891
MELA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.1944
p.S1387F
DO222542
MELA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.1944
p.A1367T
DO232761
PBCA
ICGC
VRVRLPRVG
DEG_APCC_DBOX_1
0.1389
p.R1380H
SIDM02069
Colorectal Carcinoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.7133
p.R1380H
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.7133
p.R1370S
SIDM00683
Prostate Carcinoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370S
SIDM01397
Melanoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370S
SIDM01775
B-Cell Non-Hodgkin's Lymphoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370S
LNCaP-Clone-FGC
prostate
COSMIC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370C
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370C
ACH-000981
Leukemia
CCLE
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.R1370C
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2222
p.S1387C
SIDM00893
Breast Carcinoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.1944
p.S1387C
ACH-000536
Breast Cancer
CCLE
VRVRLPRVG
DEG_APCC_DBOX_1
0.1944
p.S1387C
BT-20
breast
COSMIC
VRVRLPRVG
DEG_APCC_DBOX_1
0.1944
p.R1391W
SIDM00420
Bladder Carcinoma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.0833
p.R1391W
ACH-000566
Bladder Cancer
CCLE
VRVRLPRVG
DEG_APCC_DBOX_1
0.0833
p.R1391W
SW1710
urinary_tract
COSMIC
VRVRLPRVG
DEG_APCC_DBOX_1
0.0833
p.R1373G
SIDM00006
Other Solid Cancers
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.R1373G
ACH-001552
Skin Cancer
CCLE
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.R1373G
MCC26
skin
COSMIC
VRVRLPRVG
DEG_APCC_DBOX_1
0.3056
p.G1372V
SIDM01577
Plasma Cell Myeloma
GDSC
VRVRLPRVG
DEG_APCC_DBOX_1
0.2778
Drug responses associated with PRX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVRLPRVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXM0
Periaxin
DEG_APCC_DBOX_1
1374:1382
VRVRLPRVG
APC,CDC20,FZR1
0.8967
More...