DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVTPLPS
Uniprot ID:
Q8NCD3
Source protein:
Holliday junction recognition protein
Source gene:
HJURP
Class:
DEG_SCF_FBW7_1
Location:
175:182
E3 ligase:
FBXW7
DEGRON score:
0.88
ASA_SCORE:
66.55
COIL:
0.6474
CONS_SCORE:
0.592
DSS_SCORE:
0.4217
HELIX:
0.0388
FCONS_SCORE:
0.9401
RIG_SCORE:
0.7644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T178S
TCGA-86-A4JF
LUAD
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.8227
p.R176C
TCGA-AJ-A3BG
UCEC
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.719
p.P186L
TCGA-B5-A1MX
UCEC
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.2222
p.A171T
TCGA-B7-5816
STAD
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.2222
p.E165G
TCGA-BH-A1FH
BRCA
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.0556
p.E165G
DO3946
BRCA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.0556
p.P191H
TCGA-EB-A24D
SKCM
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.0833
p.P191L
TCGA-FR-A726
SKCM
TCGA
VRVTPLPS
DEG_SCF_FBW7_1
0.0833
p.E165Q
DO229357
BTCA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.0556
p.R173G
DO220479
KICH
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.2778
p.A172D
DO228948
LICA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.25
p.A171D
DO228985
LICA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.2222
p.P166T
DO229031
LICA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.0833
p.A190V
DO220882
MELA
ICGC
VRVTPLPS
DEG_SCF_FBW7_1
0.1111
p.V188M
SIDM01101
Neuroblastoma
GDSC
VRVTPLPS
DEG_SCF_FBW7_1
0.1667
p.V188M
SIDM01010
T-Cell Non-Hodgkin's Lymphoma
GDSC
VRVTPLPS
DEG_SCF_FBW7_1
0.1667
p.V188M
SIDM01138
Pancreatic Carcinoma
GDSC
VRVTPLPS
DEG_SCF_FBW7_1
0.1667
p.P179R
ACH-001685
Lymphoma
CCLE
VRVTPLPS
DEG_SCF_FBW7_1
0.7512
p.H184L
NCI-H1568
lung
COSMIC
VRVTPLPS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with HJURP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVTPLPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NCD3
Holliday junction recognition protein
DEG_SCF_FBW7_1
175:182
VRVTPLPS
FBXW7
0.88
More...