DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVYAE
Uniprot ID:
O95394
Source protein:
Phosphoacetylglucosamine mutase
Source gene:
PGM3
Class:
LIG_APCC_ABBA_1
Location:
504:509
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5341
ASA_SCORE:
25.65
COIL:
0.0227
CONS_SCORE:
0.8611
DSS_SCORE:
0.4115
HELIX:
0.0025
FCONS_SCORE:
1.221
RIG_SCORE:
0.8535
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D511Y
TCGA-AA-3984
COAD
TCGA
VRVYAE
LIG_APCC_ABBA_1
0.2778
p.D511Y
DO9002
COAD
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.2778
p.K515R
TCGA-DI-A1BU
UCEC
TCGA
VRVYAE
LIG_APCC_ABBA_1
0.1667
p.K515R
DO42023
UCEC
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.1667
p.G504V
TCGA-EO-A22R
UCEC
TCGA
VRVYAE
LIG_APCC_ABBA_1
0.7532
p.D494V
TCGA-HP-A5N0
LIHC
TCGA
VRVYAE
LIG_APCC_ABBA_1
0.0556
p.R496W
DO233858
GACA
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.1111
p.R496W
DO13522
GBM
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.1111
p.V504I
DO233942
GACA
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.5965
p.H518N
DO229015
LICA
ICGC
VRVYAE
LIG_APCC_ABBA_1
0.0833
p.P503L
SIDM00296
Small Cell Lung Carcinoma
GDSC
VRVYAE
LIG_APCC_ABBA_1
0.3056
p.P503L
LU-134-A
lung
COSMIC
VRVYAE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with PGM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVYAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95394
Phosphoacetylglucosamine mutase
LIG_APCC_ABBA_1
504:509
VRVYAE
APC,CDC20,FZR1
0.5341
More...