DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRWLLKKVF
Uniprot ID:
Q12772
Source protein:
Sterol regulatory element-binding protein 2
Source gene:
SREBF2
Class:
DEG_APCC_DBOX_1
Location:
634:642
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7405
ASA_SCORE:
46.3778
COIL:
0.198
CONS_SCORE:
0.5112
DSS_SCORE:
0.0345
HELIX:
0.7676
FCONS_SCORE:
1.2515
RIG_SCORE:
0.9808
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R625C
TCGA-06-0126
GBM
TCGA
VRWLLKKVF
DEG_APCC_DBOX_1
0.0833
p.R625C
DO11519
GBM
ICGC
VRWLLKKVF
DEG_APCC_DBOX_1
0.0833
p.R646W
TCGA-A6-5661
COAD
TCGA
VRWLLKKVF
DEG_APCC_DBOX_1
0.2222
p.R646W
DO8634
COAD
ICGC
VRWLLKKVF
DEG_APCC_DBOX_1
0.2222
p.K639N
TCGA-AJ-A2QM
UCEC
TCGA
VRWLLKKVF
DEG_APCC_DBOX_1
0.5806
p.K639N
TCGA-AX-A05Z
UCEC
TCGA
VRWLLKKVF
DEG_APCC_DBOX_1
0.5806
p.K639N
DO40884
UCEC
ICGC
VRWLLKKVF
DEG_APCC_DBOX_1
0.5806
p.K639N
DO43690
UCEC
ICGC
VRWLLKKVF
DEG_APCC_DBOX_1
0.5806
p.V634M
TCGA-CG-4436
STAD
TCGA
VRWLLKKVF
DEG_APCC_DBOX_1
0.6097
p.V634M
DO38320
STAD
ICGC
VRWLLKKVF
DEG_APCC_DBOX_1
0.6097
p.L638F
SIDM00789
Colorectal Carcinoma
GDSC
VRWLLKKVF
DEG_APCC_DBOX_1
0.6981
p.L638F
SIDM00829
Acute Myeloid Leukemia
GDSC
VRWLLKKVF
DEG_APCC_DBOX_1
0.6981
p.L638F
HL-60
haematopoietic_and_lymphoid_tissue
COSMIC
VRWLLKKVF
DEG_APCC_DBOX_1
0.6981
p.E652D
SIDM00596
Endometrial Carcinoma
GDSC
VRWLLKKVF
DEG_APCC_DBOX_1
0.0556
p.E652D
ACH-000941
Endometrial/Uterine Cancer
CCLE
VRWLLKKVF
DEG_APCC_DBOX_1
0.0556
p.E652D
ACH-000954
Endometrial/Uterine Cancer
CCLE
VRWLLKKVF
DEG_APCC_DBOX_1
0.0556
p.E652D
ACH-001517
Endometrial/Uterine Cancer
CCLE
VRWLLKKVF
DEG_APCC_DBOX_1
0.0556
p.E652D
HEC-1
endometrium
COSMIC
VRWLLKKVF
DEG_APCC_DBOX_1
0.0556
p.A647P
IPC-298
skin
COSMIC
VRWLLKKVF
DEG_APCC_DBOX_1
0.1944
p.A641V
HL-60
haematopoietic_and_lymphoid_tissue
COSMIC
VRWLLKKVF
DEG_APCC_DBOX_1
0.6936
p.G650A
IPC-298
skin
COSMIC
VRWLLKKVF
DEG_APCC_DBOX_1
0.1111
Drug responses associated with SREBF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRWLLKKVF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12772
Sterol regulatory element-binding protein 2
DEG_APCC_DBOX_1
634:642
VRWLLKKVF
APC,CDC20,FZR1
0.7405
More...