DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSKTPKKT
Uniprot ID:
Q7Z333
Source protein:
Probable helicase senataxin
Source gene:
SETX
Class:
DEG_SCF_FBW7_1
Location:
1238:1245
E3 ligase:
FBXW7
DEGRON score:
0.9957
ASA_SCORE:
110.875
COIL:
0.9245
CONS_SCORE:
0.281
DSS_SCORE:
0.6401
HELIX:
0.0185
FCONS_SCORE:
1.1247
RIG_SCORE:
0.6707
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I1233M
TCGA-05-4389
LUAD
TCGA
VSKTPKKT
DEG_SCF_FBW7_1
0.1944
p.I1233M
DO24307
LUAD
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1944
p.Q1253H
TCGA-06-5416
GBM
TCGA
VSKTPKKT
DEG_SCF_FBW7_1
0.1111
p.Q1253H
DO10880
GBM
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1111
p.E1231K
TCGA-93-8067
LUAD
TCGA
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.E1231K
DO25113
LUAD
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.K1250N
TCGA-AG-A002
READ
TCGA
VSKTPKKT
DEG_SCF_FBW7_1
0.3056
p.T1241N
TCGA-DA-A1HW
SKCM
TCGA
VSKTPKKT
DEG_SCF_FBW7_1
0.7055
p.T1241N
DO38129
SKCM
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.7055
p.G1252R
DO229010
COCA
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO229013
COCA
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO229005
COCA
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO229346
LAML
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO229489
LAML
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO230659
LAML
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.G1252R
DO231140
LAML
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.1389
p.K1243R
DO234186
ESAD
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.6126
p.T1228N
DO229035
LICA
ICGC
VSKTPKKT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SETX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSKTPKKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z333
Probable helicase senataxin
DEG_SCF_FBW7_1
1238:1245
VSKTPKKT
FBXW7
0.9957
More...