DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSLFGE
Uniprot ID:
Q13439
Source protein:
Golgin subfamily A member 4
Source gene:
GOLGA4
Class:
LIG_APCC_ABBA_1
Location:
2166:2171
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7449
ASA_SCORE:
99.25
COIL:
0.8187
CONS_SCORE:
0.4126
DSS_SCORE:
0.1644
HELIX:
0.1795
FCONS_SCORE:
0.6321
RIG_SCORE:
0.8238
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2164V
TCGA-AP-A054
UCEC
TCGA
VSLFGE
LIG_APCC_ABBA_1
0.2778
p.N2161D
TCGA-CA-6718
COAD
TCGA
VSLFGE
LIG_APCC_ABBA_1
0.1944
p.E2174K
DO1285
BRCA
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.25
p.E2174K
DO222421
BTCA
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.25
p.E2174K
DO41020
UCEC
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.25
p.E2174K
DO41644
UCEC
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.25
p.E2174K
DO43907
UCEC
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.25
p.S2167L
DO14274
HNSC
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.7667
p.G2159V
DO229038
LICA
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.1389
p.R2179Q
DO41133
UCEC
ICGC
VSLFGE
LIG_APCC_ABBA_1
0.1111
p.T2179M
SIDM00237
Non-Small Cell Lung Carcinoma
GDSC
VSLFGE
LIG_APCC_ABBA_1
0.1111
p.T2179M
SIDM01027
Esophageal Squamous Cell Carcinoma
GDSC
VSLFGE
LIG_APCC_ABBA_1
0.1111
p.T2179M
SIDM00274
Gastric Carcinoma
GDSC
VSLFGE
LIG_APCC_ABBA_1
0.1111
p.T2179M
SIDM01446
Glioblastoma
GDSC
VSLFGE
LIG_APCC_ABBA_1
0.1111
p.F2169I
ACH-000298
Lung Cancer
CCLE
VSLFGE
LIG_APCC_ABBA_1
0.7415
Drug responses associated with GOLGA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSLFGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13439
Golgin subfamily A member 4
LIG_APCC_ABBA_1
2166:2171
VSLFGE
APC,CDC20,FZR1
0.7449
More...