DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSLHKE
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
LIG_APCC_ABBA_1
Location:
1584:1589
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7794
ASA_SCORE:
110.5833
COIL:
0.8938
CONS_SCORE:
0.3401
DSS_SCORE:
0.6995
HELIX:
0.0763
FCONS_SCORE:
0.9596
RIG_SCORE:
0.6121
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1576S
TCGA-22-4593
LUSC
TCGA
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.G1576S
DO27018
LUSC
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.G1576S
DO222504
MELA
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.G1576S
SIDM00781
Colorectal Carcinoma
GDSC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.G1576S
SIDM00780
Colorectal Carcinoma
GDSC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.G1576S
SNU-C2B
large_intestine
COSMIC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.R1581C
TCGA-BH-A0AY
BRCA
TCGA
VSLHKE
LIG_APCC_ABBA_1
0.25
p.R1581C
DO5025
BRCA
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.25
p.K1588N
TCGA-BR-8361
STAD
TCGA
VSLHKE
LIG_APCC_ABBA_1
0.5806
p.K1588N
DO48032
STAD
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.5806
p.D1575N
TCGA-EE-A20C
SKCM
TCGA
VSLHKE
LIG_APCC_ABBA_1
0.0833
p.D1575N
DO222775
MELA
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.0833
p.D1575N
DO47665
SKCM
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.0833
p.E1597Q
TCGA-VS-A953
CESC
TCGA
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.E1597Q
DO219727
CESC
ICGC
VSLHKE
LIG_APCC_ABBA_1
0.1111
p.S1594L
SIDM01199
Hepatocellular Carcinoma
GDSC
VSLHKE
LIG_APCC_ABBA_1
0.6389
p.S1594L
ACH-000493
Liver Cancer
CCLE
VSLHKE
LIG_APCC_ABBA_1
0.6389
p.S1594L
SNU-423
liver
COSMIC
VSLHKE
LIG_APCC_ABBA_1
0.6389
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSLHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
LIG_APCC_ABBA_1
1584:1589
VSLHKE
APC,CDC20,FZR1
0.7794
More...