DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSLTPDFS
Uniprot ID:
Q8N0V3
Source protein:
Putative ribosome-binding factor A, mitochondrial
Source gene:
RBFA
Class:
DEG_SCF_FBW7_1
Location:
127:134
E3 ligase:
FBXW7
DEGRON score:
0.59
ASA_SCORE:
48.6125
COIL:
0.5396
CONS_SCORE:
0.6706
DSS_SCORE:
0.0874
HELIX:
0.0326
FCONS_SCORE:
1.1947
RIG_SCORE:
0.8207
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D132E
TCGA-24-2290
OV
TCGA
VSLTPDFS
DEG_SCF_FBW7_1
0.5647
p.D132E
DO30090
OV
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.5647
p.R137L
TCGA-34-2604
LUSC
TCGA
VSLTPDFS
DEG_SCF_FBW7_1
0.25
p.R137L
DO26433
LUSC
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.25
p.V122A
TCGA-DF-A2KU
UCEC
TCGA
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122A
DO223286
UCEC
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.S134L
DO869
BOCA
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.7667
p.A138V
DO233652
GACA
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.2222
p.D119E
DO229227
THCA
ICGC
VSLTPDFS
DEG_SCF_FBW7_1
0.1111
p.V122M
SIDM01090
Colorectal Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00969
Ovarian Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00846
Cervical Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00849
Kidney Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00254
Neuroblastoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00875
Breast Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00032
Bladder Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00808
Burkitt's Lymphoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01173
Rhabdomyosarcoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM00785
Acute Myeloid Leukemia
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01686
Chronic Myelogenous Leukemia
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01409
Bladder Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01254
Burkitt's Lymphoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.V122M
SIDM01525
Acute Myeloid Leukemia
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.1944
p.R137P
SIDM00554
Ovarian Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.25
p.R137P
ACH-000524
Ovarian Cancer
CCLE
VSLTPDFS
DEG_SCF_FBW7_1
0.25
p.R137P
KURAMOCHI
ovary
COSMIC
VSLTPDFS
DEG_SCF_FBW7_1
0.25
p.A138T
SIDM01608
Endometrial Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.2222
p.A138T
ACH-000990
Endometrial/Uterine Cancer
CCLE
VSLTPDFS
DEG_SCF_FBW7_1
0.2222
p.V127A
SIDM01394
Kidney Carcinoma
GDSC
VSLTPDFS
DEG_SCF_FBW7_1
0.6936
Drug responses associated with RBFA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSLTPDFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N0V3
Putative ribosome-binding factor A, mitochondrial
DEG_SCF_FBW7_1
127:134
VSLTPDFS
FBXW7
0.59
More...