DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSLYGE
Uniprot ID:
O60522
Source protein:
Tudor domain-containing protein 6
Source gene:
TDRD6
Class:
LIG_APCC_ABBA_1
Location:
421:426
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5587
ASA_SCORE:
35.2167
COIL:
0.3615
CONS_SCORE:
0.5315
DSS_SCORE:
0.0115
HELIX:
0.0192
FCONS_SCORE:
1.2779
RIG_SCORE:
0.9119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R433H
TCGA-17-Z015
LUAD
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
TCGA-BR-4368
STAD
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
DO38715
STAD
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
SIDM00717
Non-Cancerous
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
SIDM00733
Small Cell Lung Carcinoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
ACH-000525
Lung Cancer
CCLE
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.R433H
ACH-002372
Non-Cancerous
CCLE
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.H417Y
TCGA-49-AAR2
LUAD
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.H417Y
DO218918
LUAD
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.H417Y
SIDM00867
Glioblastoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.H417Y
ACH-000863
Brain Cancer
CCLE
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.H417Y
DBTRG-05MG
central_nervous_system
COSMIC
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.Y424H
TCGA-A5-A0G2
UCEC
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.6118
p.Y424H
DO41235
UCEC
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.6118
p.S414T
TCGA-AO-A03P
BRCA
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.S414T
DO5633
BRCA
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.1389
p.F411C
TCGA-AP-A1E0
UCEC
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.0556
p.F411C
DO43154
UCEC
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.0556
p.H417R
TCGA-BH-A0BC
BRCA
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.H417R
DO4817
BRCA
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.2222
p.G425E
TCGA-EK-A3GK
CESC
TCGA
VSLYGE
LIG_APCC_ABBA_1
0.6087
p.G425E
DO49964
CESC
ICGC
VSLYGE
LIG_APCC_ABBA_1
0.6087
p.Y419C
SIDM00961
Ewing's Sarcoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.2778
p.Y419C
SIDM00617
Hepatocellular Carcinoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.2778
p.Y419C
SIDM01444
Glioblastoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.2778
p.Y420C
SIDM00444
Esophageal Carcinoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.3056
p.Y420C
SIDM01148
Plasma Cell Myeloma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.3056
p.G436A
SIDM00123
Kidney Carcinoma
GDSC
VSLYGE
LIG_APCC_ABBA_1
0.0556
p.G436A
ACH-000046
Kidney Cancer
CCLE
VSLYGE
LIG_APCC_ABBA_1
0.0556
p.G436A
ACHN
kidney
COSMIC
VSLYGE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with TDRD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSLYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60522
Tudor domain-containing protein 6
LIG_APCC_ABBA_1
421:426
VSLYGE
APC,CDC20,FZR1
0.5587
More...