DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSNTPLRT
Uniprot ID:
O75781
Source protein:
Paralemmin-1
Source gene:
PALM
Class:
DEG_SCF_FBW7_1
Location:
151:158
E3 ligase:
FBXW7
DEGRON score:
0.999
ASA_SCORE:
79.925
COIL:
0.8186
CONS_SCORE:
0.3681
DSS_SCORE:
0.6379
HELIX:
0.0356
FCONS_SCORE:
0.9625
RIG_SCORE:
0.7156
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N153S
TCGA-AP-A1DO
UCEC
TCGA
VSNTPLRT
DEG_SCF_FBW7_1
0.5958
p.N153S
DO43250
UCEC
ICGC
VSNTPLRT
DEG_SCF_FBW7_1
0.5958
p.T158A
TCGA-BR-4361
STAD
TCGA
VSNTPLRT
DEG_SCF_FBW7_1
0.7139
p.T158A
DO38887
STAD
ICGC
VSNTPLRT
DEG_SCF_FBW7_1
0.7139
p.T154M
DO49285
ALL
ICGC
VSNTPLRT
DEG_SCF_FBW7_1
0.8534
p.G161D
DO48452
BLCA
ICGC
VSNTPLRT
DEG_SCF_FBW7_1
0.25
p.P163L
DO229502
SKCA
ICGC
VSNTPLRT
DEG_SCF_FBW7_1
0.1944
p.G144C
SIDM00120
Prostate Carcinoma
GDSC
VSNTPLRT
DEG_SCF_FBW7_1
0.1389
p.G144C
ACH-000979
Prostate Cancer
CCLE
VSNTPLRT
DEG_SCF_FBW7_1
0.1389
p.G144C
DU-145
prostate
COSMIC
VSNTPLRT
DEG_SCF_FBW7_1
0.1389
p.N153H
SIDM00716
Squamous Cell Lung Carcinoma
GDSC
VSNTPLRT
DEG_SCF_FBW7_1
0.6312
p.N153H
ACH-000481
Lung Cancer
CCLE
VSNTPLRT
DEG_SCF_FBW7_1
0.6312
p.N153H
NCI-H2170
lung
COSMIC
VSNTPLRT
DEG_SCF_FBW7_1
0.6312
p.S162F
SIDM00153
T-Lymphoblastic Leukemia
GDSC
VSNTPLRT
DEG_SCF_FBW7_1
0.6667
p.S162F
ACH-000964
Leukemia
CCLE
VSNTPLRT
DEG_SCF_FBW7_1
0.6667
p.P142L
ACH-001634
Leukemia
CCLE
VSNTPLRT
DEG_SCF_FBW7_1
0.0833
p.A145T
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
VSNTPLRT
DEG_SCF_FBW7_1
0.6111
p.E168K
CFPAC-1
pancreas
COSMIC
VSNTPLRT
DEG_SCF_FBW7_1
0.0556
p.P153A
TE-11
oesophagus
COSMIC
VSNTPLRT
DEG_SCF_FBW7_1
0.7503
Drug responses associated with PALM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSNTPLRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75781
Paralemmin-1
DEG_SCF_FBW7_1
151:158
VSNTPLRT
FBXW7
0.999
More...