DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSPFVE
Uniprot ID:
Q9ULX3
Source protein:
RNA-binding protein NOB1
Source gene:
NOB1
Class:
LIG_APCC_ABBA_1
Location:
370:375
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.804
ASA_SCORE:
36.5
COIL:
0.7755
CONS_SCORE:
0.3096
DSS_SCORE:
0.2894
HELIX:
0.1607
FCONS_SCORE:
0.8494
RIG_SCORE:
0.7845
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S380G
TCGA-BR-7707
STAD
TCGA
VSPFVE
LIG_APCC_ABBA_1
0.1944
p.S380G
DO38487
STAD
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.1944
p.N360K
TCGA-D8-A1XK
BRCA
TCGA
VSPFVE
LIG_APCC_ABBA_1
0.0556
p.N360K
DO4749
BRCA
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.0556
p.P364L
TCGA-FS-A1ZW
SKCM
TCGA
VSPFVE
LIG_APCC_ABBA_1
0.1667
p.P364L
DO37519
SKCM
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.1667
p.R381C
TCGA-G4-6628
COAD
TCGA
VSPFVE
LIG_APCC_ABBA_1
0.1667
p.R381C
DO10132
COAD
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.1667
p.P372L
TCGA-GJ-A6C0
LIHC
TCGA
VSPFVE
LIG_APCC_ABBA_1
0.6471
p.P372L
DO48486
LIHC
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.6471
p.A368S
DO229024
LICA
ICGC
VSPFVE
LIG_APCC_ABBA_1
0.2778
p.N360S
SIDM00770
Small Cell Lung Carcinoma
GDSC
VSPFVE
LIG_APCC_ABBA_1
0.0556
p.N360S
ACH-000559
Lung Cancer
CCLE
VSPFVE
LIG_APCC_ABBA_1
0.0556
p.N360S
NCI-H1836
lung
COSMIC
VSPFVE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with NOB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSPFVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULX3
RNA-binding protein NOB1
LIG_APCC_ABBA_1
370:375
VSPFVE
APC,CDC20,FZR1
0.804
More...