DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSPHFD
Uniprot ID:
Q14008
Source protein:
Cytoskeleton-associated protein 5
Source gene:
CKAP5
Class:
LIG_APCC_ABBA_1
Location:
1527:1532
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9745
ASA_SCORE:
71.0167
COIL:
0.785
CONS_SCORE:
0.2312
DSS_SCORE:
0.4323
HELIX:
0.1322
FCONS_SCORE:
0.9675
RIG_SCORE:
0.7411
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1525W
TCGA-A5-A0G2
UCEC
TCGA
VSPHFD
LIG_APCC_ABBA_1
0.2778
p.R1525W
TCGA-A5-A0VP
UCEC
TCGA
VSPHFD
LIG_APCC_ABBA_1
0.2778
p.R1525W
DO42600
UCEC
ICGC
VSPHFD
LIG_APCC_ABBA_1
0.2778
p.R1525W
DO41235
UCEC
ICGC
VSPHFD
LIG_APCC_ABBA_1
0.2778
p.P1520S
TCGA-ER-A19O
SKCM
TCGA
VSPHFD
LIG_APCC_ABBA_1
0.1389
p.P1520S
DO38063
SKCM
ICGC
VSPHFD
LIG_APCC_ABBA_1
0.1389
p.T1541K
DO229006
LICA
ICGC
VSPHFD
LIG_APCC_ABBA_1
0.0833
p.I1542V
DO231620
LINC
ICGC
VSPHFD
LIG_APCC_ABBA_1
0.0556
p.D1532N
SIDM00860
Head and Neck Carcinoma
GDSC
VSPHFD
LIG_APCC_ABBA_1
0.6932
p.D1532N
FADU
upper_aerodigestive_tract
COSMIC
VSPHFD
LIG_APCC_ABBA_1
0.6932
p.T1541A
ACH-001991
Primary
CCLE
VSPHFD
LIG_APCC_ABBA_1
0.0833
p.S1528Y
ACH-001991
Primary
CCLE
VSPHFD
LIG_APCC_ABBA_1
0.712
Drug responses associated with CKAP5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSPHFD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14008
Cytoskeleton-associated protein 5
LIG_APCC_ABBA_1
1527:1532
VSPHFD
APC,CDC20,FZR1
0.9745
More...