DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSPHRD
Uniprot ID:
P23471
Source protein:
Receptor-type tyrosine-protein phosphatase zeta
Source gene:
PTPRZ1
Class:
LIG_APCC_ABBA_1
Location:
1379:1384
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.655
ASA_SCORE:
86.85
COIL:
0.8152
CONS_SCORE:
0.5291
DSS_SCORE:
0.4206
HELIX:
0.0388
FCONS_SCORE:
0.9463
RIG_SCORE:
0.7059
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1380Y
TCGA-A5-A0G2
UCEC
TCGA
VSPHRD
LIG_APCC_ABBA_1
0.6009
p.S1380Y
DO41235
UCEC
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.6009
p.G1385C
TCGA-CC-A9FW
LIHC
TCGA
VSPHRD
LIG_APCC_ABBA_1
0.3056
p.G1385C
DO219557
LIHC
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.3056
p.V1374A
TCGA-L9-A50W
LUAD
TCGA
VSPHRD
LIG_APCC_ABBA_1
0.1944
p.V1374A
DO49872
LUAD
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.1944
p.S1386F
TCGA-YG-AA3P
SKCM
TCGA
VSPHRD
LIG_APCC_ABBA_1
0.2778
p.S1386F
DO51300
SKCM
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.2778
p.L1393M
DO7801
COAD
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.0833
p.D1384N
DO229016
COCA
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.6932
p.D1384N
DO228947
LICA
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.6932
p.D1384N
DO230522
LUSC
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.6932
p.I1369K
DO50330
ESAD
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.0556
p.T1390P
DO234233
ESAD
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.1667
p.Q1375K
DO233299
NACA
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.2222
p.N1392D
DO229232
THCA
ICGC
VSPHRD
LIG_APCC_ABBA_1
0.1111
p.H1373L
SIDM00929
Chondrosarcoma
GDSC
VSPHRD
LIG_APCC_ABBA_1
0.1667
p.F1394L
SIDM01588
Endometrial Carcinoma
GDSC
VSPHRD
LIG_APCC_ABBA_1
0.0556
p.D1383V
ACH-000536
Breast Cancer
CCLE
VSPHRD
LIG_APCC_ABBA_1
0.7785
p.D1383V
BT-20
breast
COSMIC
VSPHRD
LIG_APCC_ABBA_1
0.7785
p.Q1386H
ACH-000962
Ovarian Cancer
CCLE
VSPHRD
LIG_APCC_ABBA_1
0.2778
p.Q1386H
ACH-001145
Ovarian Cancer
CCLE
VSPHRD
LIG_APCC_ABBA_1
0.2778
p.Q1386H
OC-314
ovary
COSMIC
VSPHRD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with PTPRZ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSPHRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23471
Receptor-type tyrosine-protein phosphatase zeta
LIG_APCC_ABBA_1
1379:1384
VSPHRD
APC,CDC20,FZR1
0.655
More...