DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSPTPEPS
Uniprot ID:
Q5JTC6
Source protein:
APC membrane recruitment protein 1
Source gene:
AMER1
Class:
DEG_SCF_FBW7_1
Location:
239:246
E3 ligase:
FBXW7
DEGRON score:
0.9384
ASA_SCORE:
92.0125
COIL:
0.9501
CONS_SCORE:
0.4286
DSS_SCORE:
0.7851
HELIX:
0.0124
FCONS_SCORE:
0.7287
RIG_SCORE:
0.5064
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P235T
TCGA-AP-A059
UCEC
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.2222
p.P235T
DO41361
UCEC
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.2222
p.E251K
TCGA-C5-A7UH
CESC
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.1944
p.E251K
TCGA-ER-A19D
SKCM
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.1944
p.E251K
DO49891
CESC
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.1944
p.E251K
DO37750
SKCM
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.1944
p.P243L
TCGA-CQ-6221
HNSC
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.7582
p.P243L
DO14622
HNSC
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.7582
p.P241A
TCGA-D8-A1JN
BRCA
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.6392
p.P241A
DO4311
BRCA
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.6392
p.T242S
TCGA-HU-8602
STAD
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.8227
p.T242S
DO47829
STAD
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.8227
p.P247A
TCGA-J2-A4AD
LUAD
TCGA
VSPTPEPS
DEG_SCF_FBW7_1
0.3056
p.P247A
DO23915
LUAD
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.3056
p.V239I
DO229026
LICA
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.5965
p.K256E
DO52393
LIHM
ICGC
VSPTPEPS
DEG_SCF_FBW7_1
0.1667
p.P248T
SIDM01195
Acute Myeloid Leukemia
GDSC
VSPTPEPS
DEG_SCF_FBW7_1
0.2778
p.P248T
SIDM01205
Acute Myeloid Leukemia
GDSC
VSPTPEPS
DEG_SCF_FBW7_1
0.2778
p.P248T
ACH-000406
Leukemia
CCLE
VSPTPEPS
DEG_SCF_FBW7_1
0.2778
p.P248T
ACH-002314
Leukemia
CCLE
VSPTPEPS
DEG_SCF_FBW7_1
0.2778
p.D233G
SIDM01002
Breast Carcinoma
GDSC
VSPTPEPS
DEG_SCF_FBW7_1
0.1667
p.D233G
ACH-000117
Breast Cancer
CCLE
VSPTPEPS
DEG_SCF_FBW7_1
0.1667
p.D233G
EFM-192A
breast
COSMIC
VSPTPEPS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with AMER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSPTPEPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JTC6
APC membrane recruitment protein 1
DEG_SCF_FBW7_1
239:246
VSPTPEPS
FBXW7
0.9384
More...