DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSSTPINE
Uniprot ID:
P82094
Source protein:
TATA element modulatory factor
Source gene:
TMF1
Class:
DEG_SCF_FBW7_2
Location:
412:419
E3 ligase:
FBXW7
DEGRON score:
0.9123
ASA_SCORE:
97.0875
COIL:
0.8998
CONS_SCORE:
0.3064
DSS_SCORE:
0.56
HELIX:
0.0709
FCONS_SCORE:
1.0039
RIG_SCORE:
0.6967
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N418D
TCGA-AP-A059
UCEC
TCGA
VSSTPINE
DEG_SCF_FBW7_2
0.5821
p.N418D
DO41361
UCEC
ICGC
VSSTPINE
DEG_SCF_FBW7_2
0.5821
p.E419K
TCGA-C5-A8XJ
CESC
TCGA
VSSTPINE
DEG_SCF_FBW7_2
0.7022
p.E419K
DO49902
CESC
ICGC
VSSTPINE
DEG_SCF_FBW7_2
0.7022
p.P408T
DO229035
LICA
ICGC
VSSTPINE
DEG_SCF_FBW7_2
0.2222
p.V403A
DO232761
PBCA
ICGC
VSSTPINE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with TMF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSTPINE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P82094
TATA element modulatory factor
DEG_SCF_FBW7_2
412:419
VSSTPINE
FBXW7
0.9123
More...