DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTPATS
Uniprot ID:
P22670
Source protein:
MHC class II regulatory factor RFX1
Source gene:
RFX1
Class:
DEG_SCF_FBW7_1
Location:
341:347
E3 ligase:
FBXW7
DEGRON score:
0.9956
ASA_SCORE:
74.8143
COIL:
0.86
CONS_SCORE:
0.3263
DSS_SCORE:
0.3825
HELIX:
0.037
FCONS_SCORE:
1.1179
RIG_SCORE:
0.7466
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P357H
TCGA-DA-A1IB
SKCM
TCGA
VSTPATS
DEG_SCF_FBW7_1
0.0556
p.P357H
DO38033
SKCM
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.0556
p.T337A
TCGA-DI-A1BU
UCEC
TCGA
VSTPATS
DEG_SCF_FBW7_1
0.2222
p.T337A
DO42023
UCEC
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.2222
p.G336C
DO230326
COCA
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.1944
p.A349E
DO229028
LICA
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.2778
p.T337K
DO229028
LICA
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.2222
p.Q348K
DO50687
ORCA
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.3056
p.A351V
DO229224
THCA
ICGC
VSTPATS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with RFX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTPATS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22670
MHC class II regulatory factor RFX1
DEG_SCF_FBW7_1
341:347
VSTPATS
FBXW7
0.9956
More...