DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTPLPE
Uniprot ID:
Q9Y5G2
Source protein:
Protocadherin gamma-B2
Source gene:
PCDHGB2
Class:
DEG_SCF_FBW7_2
Location:
352:358
E3 ligase:
FBXW7
DEGRON score:
0.9198
ASA_SCORE:
66.7143
COIL:
0.9007
CONS_SCORE:
0.5452
DSS_SCORE:
0.5176
HELIX:
0.0206
FCONS_SCORE:
0.9538
RIG_SCORE:
0.6995
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L356I
TCGA-17-Z031
LUAD
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.6063
p.G363E
TCGA-22-5480
LUSC
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.1944
p.G363E
DO26786
LUSC
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.1944
p.D342A
TCGA-27-1837
GBM
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.0556
p.D342A
DO12010
GBM
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.0556
p.S360L
TCGA-B5-A3FA
UCEC
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.2778
p.S360L
DO52402
UCEC
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.2778
p.D342N
TCGA-B5-A3S1
UCEC
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.0556
p.D342N
DO41277
UCEC
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.0556
p.E358D
TCGA-BS-A0UF
UCEC
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.6758
p.E358D
DO41488
UCEC
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.6758
p.S353P
TCGA-BS-A0UV
UCEC
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.5641
p.S353P
DO42793
UCEC
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.5641
p.P355S
TCGA-FW-A3R5
SKCM
TCGA
VSTPLPE
DEG_SCF_FBW7_2
0.6752
p.P355S
DO37406
SKCM
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.6752
p.D342E
DO230329
COCA
ICGC
VSTPLPE
DEG_SCF_FBW7_2
0.0556
p.S351L
SIDM01174
Cervical Carcinoma
GDSC
VSTPLPE
DEG_SCF_FBW7_2
0.3056
p.S351L
ACH-001402
Cervical Cancer
CCLE
VSTPLPE
DEG_SCF_FBW7_2
0.3056
p.S351L
SW756
cervix
COSMIC
VSTPLPE
DEG_SCF_FBW7_2
0.3056
p.A344V
SIDM00683
Prostate Carcinoma
GDSC
VSTPLPE
DEG_SCF_FBW7_2
0.1111
p.A344V
ACH-000977
lymph_node
CCLE
VSTPLPE
DEG_SCF_FBW7_2
0.1111
p.A344V
LNCaP-Clone-FGC
prostate
COSMIC
VSTPLPE
DEG_SCF_FBW7_2
0.1111
p.P362Q
ACH-002800
Unknown
CCLE
VSTPLPE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with PCDHGB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTPLPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5G2
Protocadherin gamma-B2
DEG_SCF_FBW7_2
352:358
VSTPLPE
FBXW7
0.9198
More...