DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTPQST
Uniprot ID:
Q9UMZ2
Source protein:
Synergin gamma
Source gene:
SYNRG
Class:
DEG_SCF_FBW7_1
Location:
643:649
E3 ligase:
FBXW7
DEGRON score:
0.9695
ASA_SCORE:
84.4714
COIL:
0.9483
CONS_SCORE:
0.3518
DSS_SCORE:
0.337
HELIX:
0.0261
FCONS_SCORE:
1.0316
RIG_SCORE:
0.652
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A657S
TCGA-AX-A06F
UCEC
TCGA
VSTPQST
DEG_SCF_FBW7_1
0.1111
p.T654I
TCGA-CL-4957
READ
TCGA
VSTPQST
DEG_SCF_FBW7_1
0.1944
p.A653T
TCGA-MT-A67F
HNSC
TCGA
VSTPQST
DEG_SCF_FBW7_1
0.2222
p.K654T
DO51189
LUAD
ICGC
VSTPQST
DEG_SCF_FBW7_1
0.1944
p.P644S
DO51280
SKCM
ICGC
VSTPQST
DEG_SCF_FBW7_1
0.6752
p.S647N
DO42280
UCEC
ICGC
VSTPQST
DEG_SCF_FBW7_1
0.7069
p.A657T
SIDM01004
Chronic Myelogenous Leukemia
GDSC
VSTPQST
DEG_SCF_FBW7_1
0.1111
p.K641E
SIDM00329
Hodgkin's Lymphoma
GDSC
VSTPQST
DEG_SCF_FBW7_1
0.2778
p.D635N
ACH-002029
Head and Neck Cancer
CCLE
VSTPQST
DEG_SCF_FBW7_1
0.1111
Drug responses associated with SYNRG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTPQST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UMZ2
Synergin gamma
DEG_SCF_FBW7_1
643:649
VSTPQST
FBXW7
0.9695
More...