DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSVHAE
Uniprot ID:
Q9Y5H7
Source protein:
Protocadherin alpha-5
Source gene:
PCDHA5
Class:
LIG_APCC_ABBA_1
Location:
507:512
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7853
ASA_SCORE:
40.45
COIL:
0.356
CONS_SCORE:
0.6349
DSS_SCORE:
0.2332
HELIX:
0.0098
FCONS_SCORE:
1.3495
RIG_SCORE:
0.75
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q520K
TCGA-49-AAR4
LUAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.1111
p.Q520K
DO218920
LUAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1111
p.P502R
TCGA-49-AARQ
LUAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.1944
p.P502R
DO51189
LUAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1944
p.S513R
TCGA-55-8511
LUAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.75
p.S513R
DO24940
LUAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.75
p.V498L
TCGA-86-8358
LUAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.0833
p.V498L
DO25471
LUAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.0833
p.A511S
TCGA-91-7771
LUAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.6477
p.A511S
DO25807
LUAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.6477
p.S508L
TCGA-A2-A0D4
BRCA
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.S508L
TCGA-EE-A182
SKCM
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.S508L
TCGA-W3-AA1R
SKCM
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.S508L
DO5347
BRCA
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.S508L
DO37814
SKCM
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.S508L
DO51275
SKCM
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.6556
p.R497Q
TCGA-A5-A0G2
UCEC
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
TCGA-A6-6648
COAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
DO10196
COAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
DO41235
UCEC
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
SIDM00323
B-Cell Non-Hodgkin's Lymphoma
GDSC
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
ACH-002313
Lymphoma
CCLE
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.R497Q
TK
haematopoietic_and_lymphoid_tissue
COSMIC
VSVHAE
LIG_APCC_ABBA_1
0.0556
p.G514S
TCGA-A6-3809
COAD
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.2778
p.G514S
DO8722
COAD
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.2778
p.Y517H
TCGA-AP-A054
UCEC
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.1944
p.Y517H
DO42256
UCEC
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1944
p.R501H
TCGA-AP-A1DK
UCEC
TCGA
VSVHAE
LIG_APCC_ABBA_1
0.1667
p.R501H
DO42033
UCEC
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1667
p.E500G
DO48385
BLCA
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1389
p.S504L
DO48369
BLCA
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.25
p.A518V
DO45079
LINC
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1667
p.R501P
DO231018
LUSC
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1667
p.E500K
DO229268
THCA
ICGC
VSVHAE
LIG_APCC_ABBA_1
0.1389
p.E500K
SIDM00545
Melanoma
GDSC
VSVHAE
LIG_APCC_ABBA_1
0.1389
p.E500K
ACH-000987
Skin Cancer
CCLE
VSVHAE
LIG_APCC_ABBA_1
0.1389
p.E500K
Mewo
skin
COSMIC
VSVHAE
LIG_APCC_ABBA_1
0.1389
p.Q520H
SIDM00810
Non-Small Cell Lung Carcinoma
GDSC
VSVHAE
LIG_APCC_ABBA_1
0.1111
p.Q520H
A427
lung
COSMIC
VSVHAE
LIG_APCC_ABBA_1
0.1111
p.A511T
SIDM00364
B-Lymphoblastic Leukemia
GDSC
VSVHAE
LIG_APCC_ABBA_1
0.6028
p.A511T
ACH-002059
Leukemia
CCLE
VSVHAE
LIG_APCC_ABBA_1
0.6028
p.A511T
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
VSVHAE
LIG_APCC_ABBA_1
0.6028
p.K515N
SIDM00333
Endometrial Carcinoma
GDSC
VSVHAE
LIG_APCC_ABBA_1
0.3611
p.K515N
ACH-000988
Endometrial/Uterine Cancer
CCLE
VSVHAE
LIG_APCC_ABBA_1
0.3611
p.K515N
MFE-319
endometrium
COSMIC
VSVHAE
LIG_APCC_ABBA_1
0.3611
Drug responses associated with PCDHA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSVHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5H7
Protocadherin alpha-5
LIG_APCC_ABBA_1
507:512
VSVHAE
APC,CDC20,FZR1
0.7853
More...