DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSVHVD
Uniprot ID:
O75592
Source protein:
E3 ubiquitin-protein ligase MYCBP2
Source gene:
MYCBP2
Class:
LIG_APCC_ABBA_1
Location:
3795:3800
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.766
ASA_SCORE:
6.95
COIL:
0.2283
CONS_SCORE:
0.5372
DSS_SCORE:
0.2477
HELIX:
0.0065
FCONS_SCORE:
1.2699
RIG_SCORE:
0.8479
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H3797Y
TCGA-AG-3893
READ
TCGA
VSVHVD
LIG_APCC_ABBA_1
0.7229
p.P3806S
TCGA-EE-A182
SKCM
TCGA
VSVHVD
LIG_APCC_ABBA_1
0.1667
p.N3785K
DO223732
CESC
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.0556
p.N3785S
DO8264
COAD
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.0556
p.H3798N
DO229009
LICA
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.7423
p.R3803Q
DO23702
LUAD
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.25
p.N3791S
DO45330
LUAD
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.2222
p.L3805I
DO232761
PBCA
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.1944
p.L3805F
DO37430
SKCM
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.1944
p.D3804N
DO50281
SKCM
ICGC
VSVHVD
LIG_APCC_ABBA_1
0.2222
p.H3797N
ACH-000577
Liver Cancer
CCLE
VSVHVD
LIG_APCC_ABBA_1
0.7423
p.H3797N
JHH-2
liver
COSMIC
VSVHVD
LIG_APCC_ABBA_1
0.7423
p.H3797R
ACH-000957
Colon/Colorectal Cancer
CCLE
VSVHVD
LIG_APCC_ABBA_1
0.8244
p.H3797R
LS-180
large_intestine
COSMIC
VSVHVD
LIG_APCC_ABBA_1
0.8244
Drug responses associated with MYCBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSVHVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75592
E3 ubiquitin-protein ligase MYCBP2
LIG_APCC_ABBA_1
3795:3800
VSVHVD
APC,CDC20,FZR1
0.766
More...