DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSVTPPEE
Uniprot ID:
Q05209
Source protein:
Tyrosine-protein phosphatase non-receptor type 12
Source gene:
PTPN12
Class:
DEG_SCF_FBW7_2
Location:
506:513
E3 ligase:
FBXW7
DEGRON score:
0.9801
ASA_SCORE:
93.2375
COIL:
0.9399
CONS_SCORE:
0.502
DSS_SCORE:
0.7121
HELIX:
0.0328
FCONS_SCORE:
1.0103
RIG_SCORE:
0.6257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N504D
TCGA-CV-6951
HNSC
TCGA
VSVTPPEE
DEG_SCF_FBW7_2
0.2778
p.P511Q
TCGA-EE-A3AD
SKCM
TCGA
VSVTPPEE
DEG_SCF_FBW7_2
0.5924
p.M518V
DO12898
GBM
ICGC
VSVTPPEE
DEG_SCF_FBW7_2
0.1944
p.A499S
DO229031
LICA
ICGC
VSVTPPEE
DEG_SCF_FBW7_2
0.1389
p.A499V
DO220857
MELA
ICGC
VSVTPPEE
DEG_SCF_FBW7_2
0.1389
p.T512A
DO38807
STAD
ICGC
VSVTPPEE
DEG_SCF_FBW7_2
0.7139
Drug responses associated with PTPN12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSVTPPEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q05209
Tyrosine-protein phosphatase non-receptor type 12
DEG_SCF_FBW7_2
506:513
VSVTPPEE
FBXW7
0.9801
More...