DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSVYQE
Uniprot ID:
Q6ZNL6
Source protein:
FYVE, RhoGEF and PH domain-containing protein 5
Source gene:
FGD5
Class:
LIG_APCC_ABBA_1
Location:
560:565
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8017
ASA_SCORE:
65.7
COIL:
0.5852
CONS_SCORE:
0.322
DSS_SCORE:
0.4694
HELIX:
0.0235
FCONS_SCORE:
0.8549
RIG_SCORE:
0.7497
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R575M
TCGA-19-5956
GBM
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.D572G
TCGA-A5-A0G2
UCEC
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.1389
p.E557D
TCGA-AX-A06F
UCEC
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.25
p.E557D
TCGA-EO-A22U
UCEC
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.25
p.Q564K
TCGA-CV-7252
HNSC
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.5833
p.Q564K
ACH-000901
Lung Cancer
CCLE
VSVYQE
LIG_APCC_ABBA_1
0.5833
p.H574N
TCGA-EE-A2M7
SKCM
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.0833
p.E567Q
TCGA-UY-A78K
BLCA
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.2778
p.E567K
TCGA-XX-A89A
BRCA
TCGA
VSVYQE
LIG_APCC_ABBA_1
0.2778
p.E575K
DO8898
COAD
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.E575K
DO220875
MELA
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.E575K
DO37433
SKCM
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.A556P
DO26425
LUSC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.2222
p.L570P
DO42033
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.1944
p.A554V
DO43186
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.1667
p.A554V
DO42608
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.1667
p.A554V
DO41235
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.1667
p.A558T
DO41871
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.2778
p.A558T
DO41235
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.2778
p.A558T
SW48
large_intestine
COSMIC
VSVYQE
LIG_APCC_ABBA_1
0.2778
p.A569T
DO42472
UCEC
ICGC
VSVYQE
LIG_APCC_ABBA_1
0.2222
p.P566T
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.P566T
ACH-000843
Lung Cancer
CCLE
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.P566T
HARA
lung
COSMIC
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.P566R
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.P566R
ACH-000843
Lung Cancer
CCLE
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.P566R
HARA
lung
COSMIC
VSVYQE
LIG_APCC_ABBA_1
0.3056
p.V562M
SIDM00090
Ovarian Carcinoma
GDSC
VSVYQE
LIG_APCC_ABBA_1
0.6097
p.S550P
SIDM00217
Colorectal Carcinoma
GDSC
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.S550P
ACH-000999
Colon/Colorectal Cancer
CCLE
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.S550P
SNU-1040
large_intestine
COSMIC
VSVYQE
LIG_APCC_ABBA_1
0.0556
p.V560A
ACH-002926
Unknown
CCLE
VSVYQE
LIG_APCC_ABBA_1
0.6936
p.A558V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VSVYQE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with FGD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSVYQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZNL6
FYVE, RhoGEF and PH domain-containing protein 5
LIG_APCC_ABBA_1
560:565
VSVYQE
APC,CDC20,FZR1
0.8017
More...