DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTIFPE
Uniprot ID:
Q6IPR3
Source protein:
tRNA wybutosine-synthesizing protein 3 homolog
Source gene:
TYW3
Class:
LIG_APCC_ABBA_1
Location:
252:257
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5451
ASA_SCORE:
54.7
COIL:
0.4922
CONS_SCORE:
0.4233
DSS_SCORE:
0.7458
HELIX:
0.061
FCONS_SCORE:
1.0379
RIG_SCORE:
0.8407
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D244V
TCGA-64-5781
LUAD
TCGA
VTIFPE
LIG_APCC_ABBA_1
0.1111
p.F255I
TCGA-86-8673
LUAD
TCGA
VTIFPE
LIG_APCC_ABBA_1
0.7415
p.D247Y
TCGA-98-8021
LUSC
TCGA
VTIFPE
LIG_APCC_ABBA_1
0.1944
p.Y259D
TCGA-BR-8680
STAD
TCGA
VTIFPE
LIG_APCC_ABBA_1
0.2778
p.D258N
SIDM00587
Biliary Tract Carcinoma
GDSC
VTIFPE
LIG_APCC_ABBA_1
0.3056
p.D258N
SIDM00500
Colorectal Carcinoma
GDSC
VTIFPE
LIG_APCC_ABBA_1
0.3056
p.D258N
HuCCT1
biliary_tract
COSMIC
VTIFPE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with TYW3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTIFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6IPR3
tRNA wybutosine-synthesizing protein 3 homolog
LIG_APCC_ABBA_1
252:257
VTIFPE
APC,CDC20,FZR1
0.5451
More...