DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VTLFPD
Uniprot ID:
Q9H4D0
Source protein:
Calsyntenin-2
Source gene:
CLSTN2
Class:
LIG_APCC_ABBA_1
Location:
656:661
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.946
ASA_SCORE:
53.0167
COIL:
0.7523
CONS_SCORE:
0.5514
DSS_SCORE:
0.189
HELIX:
0.0197
FCONS_SCORE:
1.4062
RIG_SCORE:
0.8412
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A647D
TCGA-AA-A010
COAD
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.0833
p.V665A
TCGA-B5-A11E
UCEC
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.2222
p.V665A
DO41644
UCEC
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.2222
p.T657I
TCGA-B5-A11I
UCEC
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.5966
p.T657I
DO41229
UCEC
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.5966
p.E651Q
TCGA-CR-6481
HNSC
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.1944
p.E651Q
DO48242
ESCA
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1944
p.E651Q
DO14990
HNSC
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1944
p.G655R
TCGA-EE-A29B
SKCM
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.3056
p.G655R
DO47255
SKCM
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.3056
p.T671I
TCGA-EE-A29D
SKCM
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.5
p.T671I
DO38123
SKCM
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.5
p.A669T
TCGA-EJ-7315
PRAD
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
TCGA-YH-A8SY
PAAD
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
DO218974
PAAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
DO33920
PACA
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
DO230531
PRAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
DO36259
PRAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
SIDM01041
Esophageal Carcinoma
GDSC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
ACH-001500
Esophageal Cancer
CCLE
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.A669T
FLO-1
oesophagus
COSMIC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.V665L
TCGA-G4-6302
COAD
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.2222
p.V665L
DO8778
COAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.2222
p.F668V
TCGA-JX-A3Q0
CESC
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.1389
p.F668V
DO51607
CESC
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1389
p.L658P
TCGA-OR-A5K2
ACC
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.6471
p.T671P
TCGA-V5-A7RE
ESCA
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.5
p.K663T
TCGA-VR-A8EQ
ESCA
TCGA
VTLFPD
LIG_APCC_ABBA_1
0.2778
p.V665G
DO50398
ESAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.2222
p.F659V
DO10842
ESAD
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.7068
p.I662M
DO44696
LICA
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.3056
p.A669V
DO222696
MELA
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.1111
p.T667P
DO222749
MELA
ICGC
VTLFPD
LIG_APCC_ABBA_1
0.6111
p.I664V
SIDM00602
Gastric Carcinoma
GDSC
VTLFPD
LIG_APCC_ABBA_1
0.25
p.I664V
ACH-000919
Gastric Cancer
CCLE
VTLFPD
LIG_APCC_ABBA_1
0.25
p.I664V
IM-95
stomach
COSMIC
VTLFPD
LIG_APCC_ABBA_1
0.25
p.P660T
SIDM00140
Melanoma
GDSC
VTLFPD
LIG_APCC_ABBA_1
0.5919
p.P660T
ACH-000968
Skin Cancer
CCLE
VTLFPD
LIG_APCC_ABBA_1
0.5919
p.P660T
COLO-792
skin
COSMIC
VTLFPD
LIG_APCC_ABBA_1
0.5919
p.S666I
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
VTLFPD
LIG_APCC_ABBA_1
0.6389
p.S666I
ACH-000925
Lung Cancer
CCLE
VTLFPD
LIG_APCC_ABBA_1
0.6389
p.F668L
ACH-001192
Bone Cancer
CCLE
VTLFPD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with CLSTN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTLFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H4D0
Calsyntenin-2
LIG_APCC_ABBA_1
656:661
VTLFPD
APC,CDC20,FZR1
0.946
More...