DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTLTPPTS
Uniprot ID:
Q9UHV7
Source protein:
Mediator of RNA polymerase II transcription subunit 13
Source gene:
MED13
Class:
DEG_SCF_FBW7_1
Location:
323:330
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
77.5125
COIL:
0.9616
CONS_SCORE:
0.3249
DSS_SCORE:
0.6428
HELIX:
0.0126
FCONS_SCORE:
0.996
RIG_SCORE:
0.6644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q335H
TCGA-CA-6717
COAD
TCGA
VTLTPPTS
DEG_SCF_FBW7_1
0.1944
p.Q335H
DO8264
COAD
ICGC
VTLTPPTS
DEG_SCF_FBW7_1
0.1944
p.Q340H
DO49665
LIAD
ICGC
VTLTPPTS
DEG_SCF_FBW7_1
0.0556
p.P318T
DO229024
LICA
ICGC
VTLTPPTS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with MED13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTLTPPTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHV7
Mediator of RNA polymerase II transcription subunit 13
DEG_SCF_FBW7_1
323:330
VTLTPPTS
FBXW7
0.9988
More...