DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VTLYEE
Uniprot ID:
Q7Z5N4
Source protein:
Protein sidekick-1
Source gene:
SDK1
Class:
LIG_APCC_ABBA_1
Location:
1119:1124
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8324
ASA_SCORE:
64.75
COIL:
0.1593
CONS_SCORE:
0.3852
DSS_SCORE:
0.5073
HELIX:
0.0107
FCONS_SCORE:
0.921
RIG_SCORE:
0.8765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1124D
TCGA-43-3920
LUSC
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.5647
p.E1124D
TCGA-AP-A059
UCEC
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.5647
p.E1124D
DO26445
LUSC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.5647
p.E1124D
DO41361
UCEC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.5647
p.G1113S
TCGA-49-6743
LUAD
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.1667
p.G1113S
DO26092
LUAD
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.1667
p.E1134D
TCGA-D9-A148
SKCM
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.0556
p.E1134D
DO37971
SKCM
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.0556
p.E1123K
TCGA-FR-A8YC
SKCM
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.591
p.E1123K
DO50301
SKCM
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.591
p.E1124G
TCGA-XF-A9T0
BLCA
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.7199
p.E1124G
DO51920
BLCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.7199
p.T1120I
TCGA-XR-A8TG
LIHC
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.5966
p.T1120I
DO223924
LIHC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.5966
p.D1129N
TCGA-ZF-A9RC
BLCA
TCGA
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1129N
DO219068
BLCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.P1128R
DO7214
CLLE
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.2222
p.V1119I
DO231871
LINC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.5965
p.E1124Q
DO230961
LUSC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.6744
p.E1124Q
DO224594
LUSC
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.6744
p.P1128H
DO229253
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.2222
p.L1121I
DO229213
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.6063
p.M1132I
DO229232
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.1111
p.Q1131K
DO229234
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.1389
p.T1120A
DO229240
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.6028
p.E1115D
DO229250
THCA
ICGC
VTLYEE
LIG_APCC_ABBA_1
0.2222
p.D1114N
SIDM00426
Rhabdomyosarcoma
GDSC
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
SIDM00214
Colorectal Carcinoma
GDSC
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
ACH-000100
Sarcoma
CCLE
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
ACH-000955
Colon/Colorectal Cancer
CCLE
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
ACH-001765
Sarcoma
CCLE
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
RH-41
soft_tissue
COSMIC
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.D1114N
SNU-407
large_intestine
COSMIC
VTLYEE
LIG_APCC_ABBA_1
0.1944
p.I1112V
SIDM00444
Esophageal Carcinoma
GDSC
VTLYEE
LIG_APCC_ABBA_1
0.1389
p.I1112V
OACM5-1
oesophagus
COSMIC
VTLYEE
LIG_APCC_ABBA_1
0.1389
p.Y1122C
SIDM00217
Colorectal Carcinoma
GDSC
VTLYEE
LIG_APCC_ABBA_1
0.7087
p.Y1122C
ACH-000999
Colon/Colorectal Cancer
CCLE
VTLYEE
LIG_APCC_ABBA_1
0.7087
p.Y1122C
SNU-1040
large_intestine
COSMIC
VTLYEE
LIG_APCC_ABBA_1
0.7087
p.Y1122F
SIDM01686
Chronic Myelogenous Leukemia
GDSC
VTLYEE
LIG_APCC_ABBA_1
0.6417
p.Y1122F
ACH-000462
Leukemia
CCLE
VTLYEE
LIG_APCC_ABBA_1
0.6417
Drug responses associated with SDK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTLYEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z5N4
Protein sidekick-1
LIG_APCC_ABBA_1
1119:1124
VTLYEE
APC,CDC20,FZR1
0.8324
More...