DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPASS
Uniprot ID:
Q16555
Source protein:
Dihydropyrimidinase-related protein 2
Source gene:
DPYSL2
Class:
DEG_SCF_FBW7_1
Location:
513:518
E3 ligase:
FBXW7
DEGRON score:
0.9996
ASA_SCORE:
75.6667
COIL:
0.8598
CONS_SCORE:
0.2296
DSS_SCORE:
0.5558
HELIX:
0.1125
FCONS_SCORE:
1.0219
RIG_SCORE:
0.6877
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R517H
DO43891
UCEC
ICGC
VTPASS
DEG_SCF_FBW7_1
0.8244
p.P515L
DO229446
SKCA
ICGC
VTPASS
DEG_SCF_FBW7_1
0.7582
p.D520N
SIDM01609
Endometrial Carcinoma
GDSC
VTPASS
DEG_SCF_FBW7_1
0.7222
p.N513S
DO50867
LICA
ICGC
VTPASS
DEG_SCF_FBW7_1
0.7069
p.T521M
TCGA-EC-A24G
UCEC
TCGA
VTPASS
DEG_SCF_FBW7_1
0.6944
p.P515S
TCGA-EB-A5UL
SKCM
TCGA
VTPASS
DEG_SCF_FBW7_1
0.6752
p.T509M
TCGA-G4-6586
COAD
TCGA
VTPASS
DEG_SCF_FBW7_1
0.6667
p.Q509H
DO41020
UCEC
ICGC
VTPASS
DEG_SCF_FBW7_1
0.6667
p.G507D
HCT-15
large_intestine
COSMIC
VTPASS
DEG_SCF_FBW7_1
0.6111
p.V513I
TCGA-AU-6004
COAD
TCGA
VTPASS
DEG_SCF_FBW7_1
0.5965
p.P525S
DO219481
SKCM
ICGC
VTPASS
DEG_SCF_FBW7_1
0.5833
p.I510T
DO12712
GBM
ICGC
VTPASS
DEG_SCF_FBW7_1
0.25
p.A508S
DO229018
LICA
ICGC
VTPASS
DEG_SCF_FBW7_1
0.1944
p.V523L
DO229041
LICA
ICGC
VTPASS
DEG_SCF_FBW7_1
0.1944
p.A524V
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
VTPASS
DEG_SCF_FBW7_1
0.1667
p.V506A
TCGA-19-4065
GBM
TCGA
VTPASS
DEG_SCF_FBW7_1
0.1389
p.I506V
SIDM00047
Non-Small Cell Lung Carcinoma
GDSC
VTPASS
DEG_SCF_FBW7_1
0.1389
p.I506V
EMC-BAC-2
lung
COSMIC
VTPASS
DEG_SCF_FBW7_1
0.1389
p.S526F
SIDM00217
Colorectal Carcinoma
GDSC
VTPASS
DEG_SCF_FBW7_1
0.1111
p.S526F
SNU-1040
large_intestine
COSMIC
VTPASS
DEG_SCF_FBW7_1
0.1111
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Drug responses associated with DPYSL2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of VTPASS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16555
Dihydropyrimidinase-related protein 2
DEG_SCF_FBW7_1
513:518
VTPASS
FBXW7
0.9996
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