DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPCFE
Uniprot ID:
Q16363
Source protein:
Laminin subunit alpha-4
Source gene:
LAMA4
Class:
DEG_SCF_FBW7_2
Location:
1637:1642
E3 ligase:
FBXW7
DEGRON score:
0.9094
ASA_SCORE:
51.5667
COIL:
0.7205
CONS_SCORE:
0.5738
DSS_SCORE:
0.2723
HELIX:
0.0442
FCONS_SCORE:
1.1879
RIG_SCORE:
0.8077
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1642K
TCGA-5N-A9KM
BLCA
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.7022
p.T1634I
TCGA-78-7220
LUAD
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.25
p.S1652L
TCGA-86-8073
LUAD
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.0556
p.S1627C
TCGA-A8-A06Q
BRCA
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.0556
p.P1644L
TCGA-AP-A1DK
UCEC
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.2778
p.G1643D
TCGA-AX-A1CE
UCEC
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.3056
p.G1643S
TCGA-B0-4698
KIRC
TCGA
VTPCFE
DEG_SCF_FBW7_2
0.3056
p.E1635K
DO223517
BLCA
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.2778
p.E1647Q
DO15422
HNSC
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.1944
p.G1636S
DO20368
KIRC
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.3056
p.T1631N
DO229027
LICA
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.1667
p.T1627I
DO24409
LUAD
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.0556
p.S1645L
DO23624
LUAD
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.25
p.E1647K
DO45482
LUSC
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.1944
p.P1637L
DO42033
UCEC
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.7582
p.G1636D
DO42280
UCEC
ICGC
VTPCFE
DEG_SCF_FBW7_2
0.3056
p.V1651L
OVCAR-3
ovary
COSMIC
VTPCFE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with LAMA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPCFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16363
Laminin subunit alpha-4
DEG_SCF_FBW7_2
1637:1642
VTPCFE
FBXW7
0.9094
More...