DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPHGT
Uniprot ID:
O60320
Source protein:
Protein FAM189A1
Source gene:
FAM189A1
Class:
DEG_SCF_FBW7_1
Location:
224:229
E3 ligase:
FBXW7
DEGRON score:
0.8431
ASA_SCORE:
80.5667
COIL:
0.9128
CONS_SCORE:
0.4241
DSS_SCORE:
0.3978
HELIX:
0.0398
FCONS_SCORE:
0.9898
RIG_SCORE:
0.6863
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V230I
TCGA-ZB-A966
THYM
TCGA
VTPHGT
DEG_SCF_FBW7_1
0.3056
p.V230I
ACH-001518
Endometrial/Uterine Cancer
CCLE
VTPHGT
DEG_SCF_FBW7_1
0.3056
p.G228S
DO231075
LUSC
ICGC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00463
T-Lymphoblastic Leukemia
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00362
Burkitt's Lymphoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00465
Ovarian Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00973
Melanoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00394
Cervical Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM01196
Hepatocellular Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00599
Osteosarcoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00251
Gastric Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00290
Gastric Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00325
Esophageal Squamous Cell Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00326
Esophageal Squamous Cell Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00996
Thyroid Gland Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.G228S
SIDM00338
Acute Myeloid Leukemia
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.5882
p.R215S
DO42424
UCEC
ICGC
VTPHGT
DEG_SCF_FBW7_1
0.0833
p.R215M
SIDM01951
Colorectal Carcinoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.0833
p.H232Y
SIDM00002
Neuroblastoma
GDSC
VTPHGT
DEG_SCF_FBW7_1
0.25
p.H232Y
NBsusSR
autonomic_ganglia
COSMIC
VTPHGT
DEG_SCF_FBW7_1
0.25
Drug responses associated with FAM189A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPHGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60320
Protein FAM189A1
DEG_SCF_FBW7_1
224:229
VTPHGT
FBXW7
0.8431
More...