DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPIDS
Uniprot ID:
Q5JSZ5
Source protein:
Protein PRRC2B
Source gene:
PRRC2B
Class:
DEG_SCF_FBW7_1
Location:
735:740
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
99.8
COIL:
0.9813
CONS_SCORE:
0.8148
DSS_SCORE:
0.5497
HELIX:
0.008
FCONS_SCORE:
0.8763
RIG_SCORE:
0.7075
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P742H
TCGA-G4-6588
COAD
TCGA
VTPIDS
DEG_SCF_FBW7_1
0.2778
p.P742H
DO10140
COAD
ICGC
VTPIDS
DEG_SCF_FBW7_1
0.2778
p.P742H
SIDM01951
Colorectal Carcinoma
GDSC
VTPIDS
DEG_SCF_FBW7_1
0.2778
p.C726R
TCGA-LC-A66R
BLCA
TCGA
VTPIDS
DEG_SCF_FBW7_1
0.0833
p.C726R
DO44031
BLCA
ICGC
VTPIDS
DEG_SCF_FBW7_1
0.0833
p.I738F
TCGA-NC-A5HP
LUSC
TCGA
VTPIDS
DEG_SCF_FBW7_1
0.6304
p.I738F
DO219199
LUSC
ICGC
VTPIDS
DEG_SCF_FBW7_1
0.6304
p.R733T
TCGA-Q1-A73O
CESC
TCGA
VTPIDS
DEG_SCF_FBW7_1
0.2778
p.R733T
DO51612
CESC
ICGC
VTPIDS
DEG_SCF_FBW7_1
0.2778
p.P729S
DO229341
BTCA
ICGC
VTPIDS
DEG_SCF_FBW7_1
0.1667
p.W744R
SIDM00258
Neuroblastoma
GDSC
VTPIDS
DEG_SCF_FBW7_1
0.2222
p.W744R
SIDM00564
Ovarian Carcinoma
GDSC
VTPIDS
DEG_SCF_FBW7_1
0.2222
p.P737S
SIDM00853
Other Sarcomas
GDSC
VTPIDS
DEG_SCF_FBW7_1
0.6752
p.P737S
ACH-000835
Sarcoma
CCLE
VTPIDS
DEG_SCF_FBW7_1
0.6752
p.P737S
GCT
soft_tissue
COSMIC
VTPIDS
DEG_SCF_FBW7_1
0.6752
p.R733I
ACH-000306
Non-Cancerous
CCLE
VTPIDS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with PRRC2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPIDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JSZ5
Protein PRRC2B
DEG_SCF_FBW7_1
735:740
VTPIDS
FBXW7
0.998
More...