DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPKLE
Uniprot ID:
Q8IX90
Source protein:
Spindle and kinetochore-associated protein 3
Source gene:
SKA3
Class:
DEG_SCF_FBW7_2
Location:
216:221
E3 ligase:
FBXW7
DEGRON score:
0.8346
ASA_SCORE:
74.6333
COIL:
0.7483
CONS_SCORE:
0.6116
DSS_SCORE:
0.1076
HELIX:
0.1505
FCONS_SCORE:
0.814
RIG_SCORE:
0.8546
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E214K
TCGA-17-Z028
LUAD
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.E214K
TCGA-22-5485
LUSC
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.E214K
DO26553
LUSC
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.Y228F
TCGA-AA-3811
COAD
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.5833
p.Y228F
DO7962
COAD
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.5833
p.V216A
TCGA-B5-A11E
UCEC
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.6936
p.V216A
DO41644
UCEC
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.6936
p.M210I
TCGA-B7-5816
STAD
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.1667
p.M210I
DO38599
STAD
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.1667
p.F213S
TCGA-DF-A2KU
UCEC
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.25
p.F213S
DO223286
UCEC
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.25
p.F213V
TCGA-DK-A6AW
BLCA
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.25
p.F213V
DO48566
BLCA
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.25
p.E214Q
TCGA-VS-A9UH
CESC
TCGA
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.E214Q
DO51642
CESC
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.H222Q
DO229036
LICA
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.3056
p.H222Y
DO232761
PBCA
ICGC
VTPKLE
DEG_SCF_FBW7_2
0.3056
p.F223I
SIDM01206
Neuroblastoma
GDSC
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.F223I
ACH-002248
Neuroblastoma
CCLE
VTPKLE
DEG_SCF_FBW7_2
0.2778
p.F223I
IMR-5
autonomic_ganglia
COSMIC
VTPKLE
DEG_SCF_FBW7_2
0.2778
Drug responses associated with SKA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPKLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IX90
Spindle and kinetochore-associated protein 3
DEG_SCF_FBW7_2
216:221
VTPKLE
FBXW7
0.8346
More...