DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPKPE
Uniprot ID:
O94966
Source protein:
Ubiquitin carboxyl-terminal hydrolase 19
Source gene:
USP19
Class:
DEG_SCF_FBW7_2
Location:
451:456
E3 ligase:
FBXW7
DEGRON score:
0.943
ASA_SCORE:
97.45
COIL:
0.9418
CONS_SCORE:
0.2999
DSS_SCORE:
0.7089
HELIX:
0.0292
FCONS_SCORE:
0.9166
RIG_SCORE:
0.6264
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R446C
TCGA-59-2349
OV
TCGA
VTPKPE
DEG_SCF_FBW7_2
0.6389
p.H442N
TCGA-85-8582
LUSC
TCGA
VTPKPE
DEG_SCF_FBW7_2
0.0833
p.E458D
TCGA-AP-A059
UCEC
TCGA
VTPKPE
DEG_SCF_FBW7_2
0.2778
p.C463Y
TCGA-BD-A2L6
LIHC
TCGA
VTPKPE
DEG_SCF_FBW7_2
0.25
p.P443T
DO228971
LICA
ICGC
VTPKPE
DEG_SCF_FBW7_2
0.1111
p.E461K
DO45515
LUSC
ICGC
VTPKPE
DEG_SCF_FBW7_2
0.6389
p.D445N
DO37130
READ
ICGC
VTPKPE
DEG_SCF_FBW7_2
0.1667
p.V449L
SIDM00718
Non-Small Cell Lung Carcinoma
GDSC
VTPKPE
DEG_SCF_FBW7_2
0.2778
p.V449L
ACH-000860
Lung Cancer
CCLE
VTPKPE
DEG_SCF_FBW7_2
0.2778
p.V449L
NCI-H358
lung
COSMIC
VTPKPE
DEG_SCF_FBW7_2
0.2778
p.T452N
T84
large_intestine
COSMIC
VTPKPE
DEG_SCF_FBW7_2
0.8166
p.P447T
HCT-15
large_intestine
COSMIC
VTPKPE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with USP19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPKPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94966
Ubiquitin carboxyl-terminal hydrolase 19
DEG_SCF_FBW7_2
451:456
VTPKPE
FBXW7
0.943
More...