DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPLDE
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SCF_FBW7_2
Location:
1060:1065
E3 ligase:
FBXW7
DEGRON score:
0.7829
ASA_SCORE:
94.6167
COIL:
0.8217
CONS_SCORE:
0.3736
DSS_SCORE:
0.6671
HELIX:
0.0478
FCONS_SCORE:
0.8283
RIG_SCORE:
0.7273
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1057N
TCGA-AX-A2HC
UCEC
TCGA
VTPLDE
DEG_SCF_FBW7_2
0.3611
p.K1057N
DO41572
UCEC
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.3611
p.D1069N
TCGA-BF-A1PU
SKCM
TCGA
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.D1069N
TCGA-CV-6938
HNSC
TCGA
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.D1069N
TCGA-XF-A9SU
BLCA
TCGA
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.D1069N
DO223600
BLCA
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.D1069N
DO14462
HNSC
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.D1069N
DO50278
SKCM
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.2222
p.E1058K
TCGA-QB-A6FS
SKCM
TCGA
VTPLDE
DEG_SCF_FBW7_2
0.2778
p.E1058K
DO48654
SKCM
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.2778
p.A1053S
DO233951
GACA
ICGC
VTPLDE
DEG_SCF_FBW7_2
0.1389
p.L1063P
SIDM00871
Non-Cancerous
GDSC
VTPLDE
DEG_SCF_FBW7_2
0.6471
p.L1063P
SIDM00872
Breast Carcinoma
GDSC
VTPLDE
DEG_SCF_FBW7_2
0.6471
p.V1061A
NCI-H748
lung
COSMIC
VTPLDE
DEG_SCF_FBW7_2
0.6936
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPLDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SCF_FBW7_2
1060:1065
VTPLDE
FBXW7
0.7829
More...