DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPLSS
Uniprot ID:
Q14766
Source protein:
Latent-transforming growth factor beta-binding protein 1
Source gene:
LTBP1
Class:
DEG_SCF_FBW7_1
Location:
289:294
E3 ligase:
FBXW7
DEGRON score:
0.9212
ASA_SCORE:
80.0833
COIL:
0.7738
CONS_SCORE:
0.4541
DSS_SCORE:
0.4238
HELIX:
0.0595
FCONS_SCORE:
0.9861
RIG_SCORE:
0.6904
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L292V
TCGA-4Z-AA7O
BLCA
TCGA
VTPLSS
DEG_SCF_FBW7_1
0.5654
p.L292V
DO51865
BLCA
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.5654
p.Q283H
TCGA-A5-A0G1
UCEC
TCGA
VTPLSS
DEG_SCF_FBW7_1
0.1667
p.Q283H
DO42472
UCEC
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.1667
p.H301L
TCGA-QC-A7B5
SARC
TCGA
VTPLSS
DEG_SCF_FBW7_1
0.1389
p.H301L
DO220239
SARC
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.1389
p.S294F
TCGA-WE-A8K5
SKCM
TCGA
VTPLSS
DEG_SCF_FBW7_1
0.7982
p.S294F
DO51282
SKCM
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.7982
p.N295T
DO234350
ESAD
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.3056
p.G289V
DO228985
LICA
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.7532
p.G289V
ACH-000744
Lung Cancer
CCLE
VTPLSS
DEG_SCF_FBW7_1
0.7532
p.G289V
NCI-H1623
lung
COSMIC
VTPLSS
DEG_SCF_FBW7_1
0.7532
p.V298L
DO229025
LICA
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.2222
p.D300Y
DO229041
LICA
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.1667
p.Y280H
DO35242
PACA
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.0833
p.M283I
DO51294
SKCM
ICGC
VTPLSS
DEG_SCF_FBW7_1
0.1667
p.E303K
ACH-000826
Lung Cancer
CCLE
VTPLSS
DEG_SCF_FBW7_1
0.0833
p.E303K
CAL-12T
lung
COSMIC
VTPLSS
DEG_SCF_FBW7_1
0.0833
p.G302D
ACH-000961
Endometrial/Uterine Cancer
CCLE
VTPLSS
DEG_SCF_FBW7_1
0.1111
p.E303G
ACH-000991
Colon/Colorectal Cancer
CCLE
VTPLSS
DEG_SCF_FBW7_1
0.0833
p.E303G
SNU-81
large_intestine
COSMIC
VTPLSS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with LTBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPLSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14766
Latent-transforming growth factor beta-binding protein 1
DEG_SCF_FBW7_1
289:294
VTPLSS
FBXW7
0.9212
More...