DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPNLS
Uniprot ID:
Q96CP6
Source protein:
Protein Aster-A
Source gene:
GRAMD1A
Class:
DEG_SCF_FBW7_1
Location:
276:281
E3 ligase:
FBXW7
DEGRON score:
0.9914
ASA_SCORE:
78.1167
COIL:
0.7765
CONS_SCORE:
0.2618
DSS_SCORE:
0.7377
HELIX:
0.148
FCONS_SCORE:
0.9875
RIG_SCORE:
0.6006
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S284G
TCGA-18-5595
LUSC
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.25
p.S284I
TCGA-18-5595
LUSC
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.25
p.S284I
TCGA-CI-6624
READ
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.25
p.P278S
TCGA-AD-6889
COAD
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.6752
p.A287T
TCGA-AX-A2HD
UCEC
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.1667
p.A287T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VTPNLS
DEG_SCF_FBW7_1
0.1667
p.A287T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.1667
p.D288H
TCGA-AX-A2IO
UCEC
TCGA
VTPNLS
DEG_SCF_FBW7_1
0.1389
p.E288Q
DO856
BLCA
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.1389
p.R280H
DO219869
LGG
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.8244
p.R280H
DO228138
PBCA
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.8244
p.G269E
DO222542
MELA
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.1389
p.R273H
DO27927
ORCA
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.25
p.R273C
DO47985
STAD
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.25
p.F268S
DO48174
UCEC
ICGC
VTPNLS
DEG_SCF_FBW7_1
0.1111
p.D286N
SIDM01300
Colorectal Carcinoma
GDSC
VTPNLS
DEG_SCF_FBW7_1
0.1944
p.D286N
SIDM00665
Gastric Carcinoma
GDSC
VTPNLS
DEG_SCF_FBW7_1
0.1944
p.D286N
Hs746T
stomach
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.1944
p.S271L
SIDM00889
Cervical Carcinoma
GDSC
VTPNLS
DEG_SCF_FBW7_1
0.6389
p.S271L
C-33-A
cervix
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.6389
p.R272C
SIDM01131
Small Cell Lung Carcinoma
GDSC
VTPNLS
DEG_SCF_FBW7_1
0.2222
p.D287N
ACH-000969
Colon/Colorectal Cancer
CCLE
VTPNLS
DEG_SCF_FBW7_1
0.1667
p.D287N
KM12
large_intestine
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.1667
p.R275Q
ACH-001414
Bladder Cancer
CCLE
VTPNLS
DEG_SCF_FBW7_1
0.3056
p.A280T
ACH-002256
Leukemia
CCLE
VTPNLS
DEG_SCF_FBW7_1
0.7139
p.A280T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.7139
p.D279N
Hs746T
stomach
COSMIC
VTPNLS
DEG_SCF_FBW7_1
0.6932
Drug responses associated with GRAMD1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPNLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96CP6
Protein Aster-A
DEG_SCF_FBW7_1
276:281
VTPNLS
FBXW7
0.9914
More...