DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPPRT
Uniprot ID:
Q12774
Source protein:
Rho guanine nucleotide exchange factor 5
Source gene:
ARHGEF5
Class:
DEG_SCF_FBW7_1
Location:
509:514
E3 ligase:
FBXW7
DEGRON score:
0.9831
ASA_SCORE:
94.05
COIL:
0.9702
CONS_SCORE:
0.218
DSS_SCORE:
0.628
HELIX:
0.0087
FCONS_SCORE:
0.8481
RIG_SCORE:
0.6119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H505R
DO5298
BRCA
ICGC
VTPPRT
DEG_SCF_FBW7_1
0.2222
p.R506G
DO29538
OV
ICGC
VTPPRT
DEG_SCF_FBW7_1
0.25
p.A504P
DO41097
UCEC
ICGC
VTPPRT
DEG_SCF_FBW7_1
0.1944
p.L514M
DO41361
UCEC
ICGC
VTPPRT
DEG_SCF_FBW7_1
0.711
p.G499E
SIDM00902
Non-Small Cell Lung Carcinoma
GDSC
VTPPRT
DEG_SCF_FBW7_1
0.0556
p.A504D
KMOE-2
haematopoietic_and_lymphoid_tissue
COSMIC
VTPPRT
DEG_SCF_FBW7_1
0.1944
p.V502L
GCT
soft_tissue
COSMIC
VTPPRT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with ARHGEF5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPPRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12774
Rho guanine nucleotide exchange factor 5
DEG_SCF_FBW7_1
509:514
VTPPRT
FBXW7
0.9831
More...