DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPQSS
Uniprot ID:
Q15147
Source protein:
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
Source gene:
PLCB4
Class:
DEG_SCF_FBW7_1
Location:
885:890
E3 ligase:
FBXW7
DEGRON score:
0.9952
ASA_SCORE:
87.65
COIL:
0.9203
CONS_SCORE:
0.24
DSS_SCORE:
0.6325
HELIX:
0.0585
FCONS_SCORE:
0.991
RIG_SCORE:
0.6611
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A881T
TCGA-02-2470
GBM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.A881T
TCGA-EI-6881
READ
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.A881T
DO13516
GBM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.A881T
DO37098
READ
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.P895S
TCGA-39-5019
LUSC
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.1944
p.P895S
DO26538
LUSC
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.1944
p.Q888H
TCGA-69-7979
LUAD
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.647
p.Q888H
DO23874
LUAD
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.647
p.A878T
TCGA-86-A4JF
LUAD
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.1389
p.A878T
TCGA-DX-AB2E
SARC
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.1389
p.A878T
DO45317
LUAD
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.1389
p.A878T
DO220073
SARC
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.1389
p.P887H
TCGA-BF-A1PU
SKCM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.7694
p.P887H
DO50278
SKCM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.7694
p.S890I
TCGA-BH-A0DE
BRCA
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.8453
p.S890I
DO2688
BRCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.8453
p.S890I
DO222539
ESCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.8453
p.T898M
TCGA-E9-A248
BRCA
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.1111
p.T898M
DO1191
BRCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.1111
p.T898M
DO3328
BRCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.1111
p.G876E
TCGA-EE-A17X
SKCM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
TCGA-EE-A20F
SKCM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
TCGA-EE-A2MN
SKCM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
TCGA-FS-A1ZS
SKCM
TCGA
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO220851
MELA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO222438
MELA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO229494
SKCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO218850
SKCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO37806
SKCM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO37423
SKCM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO37961
SKCM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
DO37931
SKCM
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
ACH-002165
Skin Cancer
CCLE
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.G876E
MZ2-MEL
skin
COSMIC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.A881S
DO229036
LICA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.A881S
DO25189
LUAD
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.2222
p.G876R
DO229467
SKCA
ICGC
VTPQSS
DEG_SCF_FBW7_1
0.0833
p.S889R
SIDM00933
Breast Carcinoma
GDSC
VTPQSS
DEG_SCF_FBW7_1
0.7427
p.S889R
ACH-000856
Breast Cancer
CCLE
VTPQSS
DEG_SCF_FBW7_1
0.7427
p.S889R
CAL-51
breast
COSMIC
VTPQSS
DEG_SCF_FBW7_1
0.7427
p.P895Q
SIDM01471
Chronic Myelogenous Leukemia
GDSC
VTPQSS
DEG_SCF_FBW7_1
0.1944
p.P895Q
ACH-000604
Leukemia
CCLE
VTPQSS
DEG_SCF_FBW7_1
0.1944
p.G888E
MZ2-MEL
skin
COSMIC
VTPQSS
DEG_SCF_FBW7_1
0.7199
Drug responses associated with PLCB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPQSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15147
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4
DEG_SCF_FBW7_1
885:890
VTPQSS
FBXW7
0.9952
More...