DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSGS
Uniprot ID:
Q9BRS8
Source protein:
La-related protein 6
Source gene:
LARP6
Class:
DEG_SCF_FBW7_1
Location:
425:430
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
59.5333
COIL:
0.9268
CONS_SCORE:
0.491
DSS_SCORE:
0.5596
HELIX:
0.0577
FCONS_SCORE:
1.0336
RIG_SCORE:
0.6103
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S421Y
TCGA-06-1802
GBM
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.6667
p.S421Y
DO12100
GBM
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.6667
p.R437H
TCGA-A5-A1OF
UCEC
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1389
p.R437H
TCGA-J2-8192
LUAD
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1389
p.R437H
DO23806
LUAD
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1389
p.R437H
DO42568
UCEC
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1389
p.M417V
TCGA-AA-3492
COAD
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1111
p.M417V
DO8224
COAD
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1111
p.R436H
TCGA-AA-A01R
COAD
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436H
DO7934
COAD
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
TCGA-B5-A3FC
UCEC
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
DO230335
COCA
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
DO41871
UCEC
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
SIDM00404
B-Cell Non-Hodgkin's Lymphoma
GDSC
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
ACH-002307
Lymphoma
CCLE
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.R436C
SU-DHL-16
haematopoietic_and_lymphoid_tissue
COSMIC
VTPSGS
DEG_SCF_FBW7_1
0.1667
p.V425I
TCGA-C5-A7UI
CESC
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.5965
p.V425I
DO49892
CESC
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.5965
p.R435W
TCGA-CV-7178
HNSC
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.1944
p.R435W
DO14774
HNSC
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1944
p.G429R
TCGA-EO-A3AS
UCEC
TCGA
VTPSGS
DEG_SCF_FBW7_1
0.6457
p.G429R
DO43466
UCEC
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.6457
p.G429S
DO48395
BLCA
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.5882
p.E440K
DO234270
ESAD
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.0556
p.P427L
DO11854
GBM
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.7582
p.P427T
DO229022
LICA
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.7031
p.P431T
DO229035
LICA
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.3056
p.R434W
DO228496
MALY
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.2222
p.R437C
DO48904
PBCA
ICGC
VTPSGS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with LARP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BRS8
La-related protein 6
DEG_SCF_FBW7_1
425:430
VTPSGS
FBXW7
0.9982
More...