DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSPS
Uniprot ID:
Q9UKG1
Source protein:
DCC-interacting protein 13-alpha
Source gene:
APPL1
Class:
DEG_SCF_FBW7_1
Location:
398:403
E3 ligase:
FBXW7
DEGRON score:
0.999
ASA_SCORE:
71.9167
COIL:
0.7807
CONS_SCORE:
0.5212
DSS_SCORE:
0.6374
HELIX:
0.1868
FCONS_SCORE:
1.1199
RIG_SCORE:
0.6389
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R412Q
TCGA-A5-A1OF
UCEC
TCGA
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R412Q
DO42568
UCEC
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R412Q
SIDM00530
Esophageal Carcinoma
GDSC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R412Q
SIDM00821
Kidney Carcinoma
GDSC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R412Q
ACH-001544
Esophageal Cancer
CCLE
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R412Q
KYAE-1
oesophagus
COSMIC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R389Q
TCGA-AX-A1C5
UCEC
TCGA
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R389Q
DO229051
LICA
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.R389Q
DO41422
UCEC
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.0833
p.E409K
TCGA-AX-A2HC
UCEC
TCGA
VTPSPS
DEG_SCF_FBW7_1
0.1667
p.E409K
DO233898
GACA
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.1667
p.E409K
DO41572
UCEC
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.1667
p.H408Y
TCGA-E6-A1LX
UCEC
TCGA
VTPSPS
DEG_SCF_FBW7_1
0.1944
p.H408Y
DO41020
UCEC
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.1944
p.V398I
TCGA-FD-A43N
BLCA
TCGA
VTPSPS
DEG_SCF_FBW7_1
0.5965
p.V398I
DO502
BLCA
ICGC
VTPSPS
DEG_SCF_FBW7_1
0.5965
p.H408Q
SIDM00254
Neuroblastoma
GDSC
VTPSPS
DEG_SCF_FBW7_1
0.1944
p.H408Q
ACH-002283
Neuroblastoma
CCLE
VTPSPS
DEG_SCF_FBW7_1
0.1944
p.H408Q
NB5
autonomic_ganglia
COSMIC
VTPSPS
DEG_SCF_FBW7_1
0.1944
p.V398G
SIDM01012
Other Blood Cancers
GDSC
VTPSPS
DEG_SCF_FBW7_1
0.7532
p.V398G
ACH-000346
Leukemia
CCLE
VTPSPS
DEG_SCF_FBW7_1
0.7532
p.V398G
JVM-3
haematopoietic_and_lymphoid_tissue
COSMIC
VTPSPS
DEG_SCF_FBW7_1
0.7532
Drug responses associated with APPL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKG1
DCC-interacting protein 13-alpha
DEG_SCF_FBW7_1
398:403
VTPSPS
FBXW7
0.999
More...