DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSRS
Uniprot ID:
P49454
Source protein:
Centromere protein F
Source gene:
CENPF
Class:
DEG_SCF_FBW7_1
Location:
252:257
E3 ligase:
FBXW7
DEGRON score:
0.9971
ASA_SCORE:
96.55
COIL:
0.7333
CONS_SCORE:
0.4762
DSS_SCORE:
0.5502
HELIX:
0.2612
FCONS_SCORE:
1.2569
RIG_SCORE:
0.7056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R256Q
TCGA-BR-8680
STAD
TCGA
VTPSRS
DEG_SCF_FBW7_1
0.6218
p.R256Q
DO47769
STAD
ICGC
VTPSRS
DEG_SCF_FBW7_1
0.6218
p.T258I
TCGA-D1-A103
UCEC
TCGA
VTPSRS
DEG_SCF_FBW7_1
0.3056
p.T258I
DO42312
UCEC
ICGC
VTPSRS
DEG_SCF_FBW7_1
0.3056
p.P254Q
TCGA-HU-A4GN
STAD
TCGA
VTPSRS
DEG_SCF_FBW7_1
0.7035
p.P254Q
DO47833
STAD
ICGC
VTPSRS
DEG_SCF_FBW7_1
0.7035
p.L259V
TCGA-LN-A49P
ESCA
TCGA
VTPSRS
DEG_SCF_FBW7_1
0.2778
p.F246L
TCGA-QB-AA9O
SKCM
TCGA
VTPSRS
DEG_SCF_FBW7_1
0.1667
p.F246L
DO51267
SKCM
ICGC
VTPSRS
DEG_SCF_FBW7_1
0.1667
p.A243V
SIDM01617
Endometrial Carcinoma
GDSC
VTPSRS
DEG_SCF_FBW7_1
0.0833
p.A243V
ACH-000994
Endometrial/Uterine Cancer
CCLE
VTPSRS
DEG_SCF_FBW7_1
0.0833
p.T258N
SIDM01628
Non-Small Cell Lung Carcinoma
GDSC
VTPSRS
DEG_SCF_FBW7_1
0.3056
p.T258N
ACH-000851
Lung Cancer
CCLE
VTPSRS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with CENPF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49454
Centromere protein F
DEG_SCF_FBW7_1
252:257
VTPSRS
FBXW7
0.9971
More...