DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSTS
Uniprot ID:
Q6NUP7
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 4
Source gene:
PPP4R4
Class:
DEG_SCF_FBW7_1
Location:
757:762
E3 ligase:
FBXW7
DEGRON score:
0.9929
ASA_SCORE:
85.9333
COIL:
0.918
CONS_SCORE:
0.3353
DSS_SCORE:
0.5925
HELIX:
0.0548
FCONS_SCORE:
1.1133
RIG_SCORE:
0.6441
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S756F
TCGA-AA-A02R
COAD
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.75
p.R772Q
TCGA-B5-A11N
UCEC
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.R772Q
TCGA-ZG-A9LZ
PRAD
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.R772Q
DO219440
PRAD
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.R772Q
DO41458
UCEC
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.K766N
TCGA-E6-A1LX
UCEC
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.3333
p.K766N
TCGA-EO-A3B0
UCEC
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.3333
p.K766N
DO219773
UCEC
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.3333
p.K766N
DO41020
UCEC
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.3333
p.G753V
TCGA-EE-A181
SKCM
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.2222
p.G753V
DO37444
SKCM
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.2222
p.S760L
TCGA-EE-A181
SKCM
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.7667
p.S760L
DO37444
SKCM
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.7667
p.R772G
TCGA-GD-A2C5
BLCA
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.R772G
DO496
BLCA
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.0556
p.I771S
TCGA-ZF-A9RC
BLCA
TCGA
VTPSTS
DEG_SCF_FBW7_1
0.0833
p.I771S
DO219068
BLCA
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.0833
p.S760W
DO222867
BTCA
ICGC
VTPSTS
DEG_SCF_FBW7_1
0.7874
Drug responses associated with PPP4R4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NUP7
Serine/threonine-protein phosphatase 4 regulatory subunit 4
DEG_SCF_FBW7_1
757:762
VTPSTS
FBXW7
0.9929
More...