DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPTAS
Uniprot ID:
Q9Y520
Source protein:
Protein PRRC2C
Source gene:
PRRC2C
Class:
DEG_SCF_FBW7_1
Location:
2309:2314
E3 ligase:
FBXW7
DEGRON score:
0.9953
ASA_SCORE:
83.6167
COIL:
0.951
CONS_SCORE:
0.5467
DSS_SCORE:
0.401
HELIX:
0.0255
FCONS_SCORE:
1.0435
RIG_SCORE:
0.7123
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2312A
TCGA-78-7539
LUAD
TCGA
VTPTAS
DEG_SCF_FBW7_1
0.6028
p.G2319C
TCGA-D3-A3CE
SKCM
TCGA
VTPTAS
DEG_SCF_FBW7_1
0.1944
p.G2319C
TCGA-FS-A1ZN
SKCM
TCGA
VTPTAS
DEG_SCF_FBW7_1
0.1944
p.A2309S
DO229035
LICA
ICGC
VTPTAS
DEG_SCF_FBW7_1
0.7588
p.A2320T
DO48719
LIRI
ICGC
VTPTAS
DEG_SCF_FBW7_1
0.1667
p.T2314A
DO26210
LUAD
ICGC
VTPTAS
DEG_SCF_FBW7_1
0.7139
p.G2321C
DO37405
SKCM
ICGC
VTPTAS
DEG_SCF_FBW7_1
0.5833
p.G2321C
DO38165
SKCM
ICGC
VTPTAS
DEG_SCF_FBW7_1
0.5833
Drug responses associated with PRRC2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y520
Protein PRRC2C
DEG_SCF_FBW7_1
2309:2314
VTPTAS
FBXW7
0.9953
More...