DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VTPTPAGT
Uniprot ID:
Q96SM3
Source protein:
Probable carboxypeptidase X1
Source gene:
CPXM1
Class:
DEG_SCF_FBW7_1
Location:
97:104
E3 ligase:
FBXW7
DEGRON score:
0.9908
ASA_SCORE:
84.95
COIL:
0.9378
CONS_SCORE:
0.3637
DSS_SCORE:
0.6034
HELIX:
0.0209
FCONS_SCORE:
0.983
RIG_SCORE:
0.6765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E109D
TCGA-AP-A0LM
UCEC
TCGA
VTPTPAGT
DEG_SCF_FBW7_1
0.1944
p.E109D
DO43306
UCEC
ICGC
VTPTPAGT
DEG_SCF_FBW7_1
0.1944
p.A93D
DO229041
LICA
ICGC
VTPTPAGT
DEG_SCF_FBW7_1
0.2222
p.T113K
DO229009
LICA
ICGC
VTPTPAGT
DEG_SCF_FBW7_1
0.0833
p.E112D
DO232224
PBCA
ICGC
VTPTPAGT
DEG_SCF_FBW7_1
0.1111
p.A108T
SIDM01612
Endometrial Carcinoma
GDSC
VTPTPAGT
DEG_SCF_FBW7_1
0.2222
p.A108T
ACH-000946
Endometrial/Uterine Cancer
CCLE
VTPTPAGT
DEG_SCF_FBW7_1
0.2222
p.G94R
ACH-001459
Colon/Colorectal Cancer
CCLE
VTPTPAGT
DEG_SCF_FBW7_1
0.25
Drug responses associated with CPXM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTPAGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SM3
Probable carboxypeptidase X1
DEG_SCF_FBW7_1
97:104
VTPTPAGT
FBXW7
0.9908
More...