DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPTPRPT
Uniprot ID:
P51693
Source protein:
Amyloid beta precursor like protein 1
Source gene:
APLP1
Class:
DEG_SCF_FBW7_1
Location:
284:291
E3 ligase:
FBXW7
DEGRON score:
0.9344
ASA_SCORE:
91.625
COIL:
0.9516
CONS_SCORE:
0.3548
DSS_SCORE:
0.4779
HELIX:
0.0144
FCONS_SCORE:
1.1189
RIG_SCORE:
0.6762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V281I
TCGA-13-0894
OV
TCGA
VTPTPRPT
DEG_SCF_FBW7_1
0.25
p.T277A
TCGA-D1-A15X
UCEC
TCGA
VTPTPRPT
DEG_SCF_FBW7_1
0.1389
p.G293S
TCGA-EJ-7782
PRAD
TCGA
VTPTPRPT
DEG_SCF_FBW7_1
0.2778
p.V280E
TCGA-EO-A3KX
UCEC
TCGA
VTPTPRPT
DEG_SCF_FBW7_1
0.2222
p.G296W
DO219737
CESC
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.1944
p.G296A
DO234149
ESAD
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.1944
p.H301P
DO49049
HNSC
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.0556
p.G276V
DO228948
LICA
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.1111
p.G276V
DO229038
LICA
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.1111
p.V275I
DO28591
OV
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.0833
p.P280S
DO49466
PACA
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.2222
p.G287S
DO36256
PRAD
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.6993
p.V274E
DO219774
UCEC
ICGC
VTPTPRPT
DEG_SCF_FBW7_1
0.0556
p.G282S
SIDM00202
Ewing's Sarcoma
GDSC
VTPTPRPT
DEG_SCF_FBW7_1
0.2778
p.G282S
ACH-002118
Bone Cancer
CCLE
VTPTPRPT
DEG_SCF_FBW7_1
0.2778
p.G282S
EW-3
bone
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.2778
p.R289K
SIDM00737
Non-Small Cell Lung Carcinoma
GDSC
VTPTPRPT
DEG_SCF_FBW7_1
0.6126
p.R289K
ACH-000904
Lung Cancer
CCLE
VTPTPRPT
DEG_SCF_FBW7_1
0.6126
p.R289K
ACH-001362
Lung Cancer
CCLE
VTPTPRPT
DEG_SCF_FBW7_1
0.6126
p.R289K
NCI-H1770
lung
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.6126
p.R291H
LIM1215
large_intestine
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.8244
p.E300K
OCUM-1
stomach
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.0833
p.G276S
EW-3
bone
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.1111
p.R284C
SW1573
lung
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.8301
p.R283K
NCI-H1770
lung
COSMIC
VTPTPRPT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with APLP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTPRPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51693
Amyloid beta precursor like protein 1
DEG_SCF_FBW7_1
284:291
VTPTPRPT
FBXW7
0.9344
More...