DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPVAE
Uniprot ID:
Q96CP6
Source protein:
Protein Aster-A
Source gene:
GRAMD1A
Class:
DEG_SCF_FBW7_2
Location:
311:316
E3 ligase:
FBXW7
DEGRON score:
0.8675
ASA_SCORE:
80.5333
COIL:
0.9085
CONS_SCORE:
0.2621
DSS_SCORE:
0.8877
HELIX:
0.0245
FCONS_SCORE:
0.8847
RIG_SCORE:
0.5874
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P313R
TCGA-GL-A4EM
KIRP
TCGA
VTPVAE
DEG_SCF_FBW7_2
0.7512
p.Y317S
DO2156
BRCA
ICGC
VTPVAE
DEG_SCF_FBW7_2
0.3056
p.S319F
DO219759
CESC
ICGC
VTPVAE
DEG_SCF_FBW7_2
0.25
p.D314Y
DO229028
LICA
ICGC
VTPVAE
DEG_SCF_FBW7_2
0.7325
p.G305D
DO42673
UCEC
ICGC
VTPVAE
DEG_SCF_FBW7_2
0.1667
p.P313T
SIDM00596
Endometrial Carcinoma
GDSC
VTPVAE
DEG_SCF_FBW7_2
0.7031
p.P313T
HEC-1
endometrium
COSMIC
VTPVAE
DEG_SCF_FBW7_2
0.7031
p.S319R
SIDM00247
Gastric Carcinoma
GDSC
VTPVAE
DEG_SCF_FBW7_2
0.25
p.S319R
MKN45
stomach
COSMIC
VTPVAE
DEG_SCF_FBW7_2
0.25
p.S312R
ACH-000356
Gastric Cancer
CCLE
VTPVAE
DEG_SCF_FBW7_2
0.7427
p.S312R
MKN45
stomach
COSMIC
VTPVAE
DEG_SCF_FBW7_2
0.7427
p.P306T
ACH-000941
Endometrial/Uterine Cancer
CCLE
VTPVAE
DEG_SCF_FBW7_2
0.1944
p.P306T
ACH-000954
Endometrial/Uterine Cancer
CCLE
VTPVAE
DEG_SCF_FBW7_2
0.1944
p.P306T
ACH-001517
Endometrial/Uterine Cancer
CCLE
VTPVAE
DEG_SCF_FBW7_2
0.1944
p.P306T
HEC-1
endometrium
COSMIC
VTPVAE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with GRAMD1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPVAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96CP6
Protein Aster-A
DEG_SCF_FBW7_2
311:316
VTPVAE
FBXW7
0.8675
More...