DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPVGS
Uniprot ID:
Q6KB66
Source protein:
Keratin, type II cytoskeletal 80
Source gene:
KRT80
Class:
DEG_SCF_FBW7_1
Location:
18:23
E3 ligase:
FBXW7
DEGRON score:
0.9232
ASA_SCORE:
67.9667
COIL:
0.826
CONS_SCORE:
0.5864
DSS_SCORE:
0.3678
HELIX:
0.014
FCONS_SCORE:
1.4879
RIG_SCORE:
0.6764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P20S
TCGA-FR-A726
SKCM
TCGA
VTPVGS
DEG_SCF_FBW7_1
0.6752
p.P20S
DO48665
SKCM
ICGC
VTPVGS
DEG_SCF_FBW7_1
0.6752
p.S29L
TCGA-S5-AA26
BLCA
TCGA
VTPVGS
DEG_SCF_FBW7_1
0.6111
p.S29L
DO51904
BLCA
ICGC
VTPVGS
DEG_SCF_FBW7_1
0.6111
p.S29L
SIDM00494
Non-Small Cell Lung Carcinoma
GDSC
VTPVGS
DEG_SCF_FBW7_1
0.6111
p.S29L
ACH-000528
Lung Cancer
CCLE
VTPVGS
DEG_SCF_FBW7_1
0.6111
p.S29L
ABC-1
lung
COSMIC
VTPVGS
DEG_SCF_FBW7_1
0.6111
p.R25Q
DO227979
COCA
ICGC
VTPVGS
DEG_SCF_FBW7_1
0.2778
p.R25Q
DO222765
COCA
ICGC
VTPVGS
DEG_SCF_FBW7_1
0.2778
p.R25Q
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
VTPVGS
DEG_SCF_FBW7_1
0.2778
p.R25Q
SIDM00736
Non-Cancerous
GDSC
VTPVGS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with KRT80 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPVGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6KB66
Keratin, type II cytoskeletal 80
DEG_SCF_FBW7_1
18:23
VTPVGS
FBXW7
0.9232
More...