DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPVGT
Uniprot ID:
P12270
Source protein:
Nucleoprotein TPR
Source gene:
TPR
Class:
DEG_SCF_FBW7_1
Location:
1862:1867
E3 ligase:
FBXW7
DEGRON score:
0.9346
ASA_SCORE:
85.25
COIL:
0.9272
CONS_SCORE:
0.4948
DSS_SCORE:
0.5747
HELIX:
0.0258
FCONS_SCORE:
0.9564
RIG_SCORE:
0.6837
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1855V
TCGA-92-8065
LUSC
TCGA
VTPVGT
DEG_SCF_FBW7_1
0.1389
p.L1855V
DO27074
LUSC
ICGC
VTPVGT
DEG_SCF_FBW7_1
0.1389
p.K1857T
TCGA-VQ-A8PO
STAD
TCGA
VTPVGT
DEG_SCF_FBW7_1
0.3056
p.K1857T
DO51773
STAD
ICGC
VTPVGT
DEG_SCF_FBW7_1
0.3056
p.E1875K
DO227807
COCA
ICGC
VTPVGT
DEG_SCF_FBW7_1
0.1111
p.A1873E
DO229038
LICA
ICGC
VTPVGT
DEG_SCF_FBW7_1
0.1667
p.K1858N
SIDM01299
Colorectal Carcinoma
GDSC
VTPVGT
DEG_SCF_FBW7_1
0.3333
p.M1872V
SIDM01113
Other Sarcomas
GDSC
VTPVGT
DEG_SCF_FBW7_1
0.1944
p.M1872V
SK-UT-1
soft_tissue
COSMIC
VTPVGT
DEG_SCF_FBW7_1
0.1944
p.S1861I
ACH-001377
Pancreatic Cancer
CCLE
VTPVGT
DEG_SCF_FBW7_1
0.3056
p.K1857R
ACH-001786
Colon/Colorectal Cancer
CCLE
VTPVGT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with TPR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPVGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12270
Nucleoprotein TPR
DEG_SCF_FBW7_1
1862:1867
VTPVGT
FBXW7
0.9346
More...