DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPWAS
Uniprot ID:
Q02952
Source protein:
A-kinase anchor protein 12
Source gene:
AKAP12
Class:
DEG_SCF_FBW7_1
Location:
607:612
E3 ligase:
FBXW7
DEGRON score:
0.9889
ASA_SCORE:
80.5833
COIL:
0.7418
CONS_SCORE:
0.8564
DSS_SCORE:
0.5535
HELIX:
0.1355
FCONS_SCORE:
0.9205
RIG_SCORE:
0.7254
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E605K
TCGA-3C-AALI
BRCA
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.2778
p.R622C
TCGA-CD-A48C
STAD
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.0556
p.T608N
TCGA-DC-4745
READ
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.8166
p.P609L
TCGA-EE-A29V
SKCM
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.7582
p.R622S
TCGA-EU-5906
KIRC
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.0556
p.D599N
TCGA-VS-A8EL
CESC
TCGA
VTPWAS
DEG_SCF_FBW7_1
0.1111
p.G605E
DO526
BLCA
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.2778
p.D617N
DO4780
BRCA
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.1944
p.D612E
DO5326
BRCA
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.6758
p.G613E
DO8490
COAD
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.3056
p.E617D
DO232761
PBCA
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.1944
p.G611R
DO37404
SKCM
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.7568
p.G597W
DO48177
UCEC
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.5
p.G597W
SNG-M
endometrium
COSMIC
VTPWAS
DEG_SCF_FBW7_1
0.5
p.D621N
DO223277
UCEC
ICGC
VTPWAS
DEG_SCF_FBW7_1
0.1944
p.D599E
SIDM00075
Non-Cancerous
GDSC
VTPWAS
DEG_SCF_FBW7_1
0.1111
p.D599E
ACH-002336
Unknown
CCLE
VTPWAS
DEG_SCF_FBW7_1
0.1111
p.P609S
SIDM01322
Oral Cavity Carcinoma
GDSC
VTPWAS
DEG_SCF_FBW7_1
0.6752
p.P609S
ACH-000735
Head and Neck Cancer
CCLE
VTPWAS
DEG_SCF_FBW7_1
0.6752
p.T618M
NCC021
kidney
COSMIC
VTPWAS
DEG_SCF_FBW7_1
0.6111
p.T618M
MOLT-13
haematopoietic_and_lymphoid_tissue
COSMIC
VTPWAS
DEG_SCF_FBW7_1
0.6111
p.E618D
SAT
upper_aerodigestive_tract
COSMIC
VTPWAS
DEG_SCF_FBW7_1
0.6111
p.E611D
SAT
upper_aerodigestive_tract
COSMIC
VTPWAS
DEG_SCF_FBW7_1
0.6758
Drug responses associated with AKAP12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPWAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02952
A-kinase anchor protein 12
DEG_SCF_FBW7_1
607:612
VTPWAS
FBXW7
0.9889
More...