DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTTPGHS
Uniprot ID:
Q71F56
Source protein:
Mediator of RNA polymerase II transcription subunit 13-like
Source gene:
MED13L
Class:
DEG_SCF_FBW7_1
Location:
756:762
E3 ligase:
FBXW7
DEGRON score:
0.9967
ASA_SCORE:
79.2
COIL:
0.9179
CONS_SCORE:
0.237
DSS_SCORE:
0.6355
HELIX:
0.0211
FCONS_SCORE:
0.8525
RIG_SCORE:
0.6207
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N770K
TCGA-CA-6717
COAD
TCGA
VTTPGHS
DEG_SCF_FBW7_1
0.1111
p.N770K
DO8264
COAD
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.1111
p.D749G
TCGA-D1-A103
UCEC
TCGA
VTTPGHS
DEG_SCF_FBW7_1
0.1389
p.D749G
DO42312
UCEC
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.1389
p.D755G
TCGA-DD-AAVY
LIHC
TCGA
VTTPGHS
DEG_SCF_FBW7_1
0.3056
p.D755G
DO52284
LIHC
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.3056
p.G760D
TCGA-DU-6392
LGG
TCGA
VTTPGHS
DEG_SCF_FBW7_1
0.6087
p.G760D
DO22237
LGG
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.6087
p.G750V
TCGA-EK-A2RM
CESC
TCGA
VTTPGHS
DEG_SCF_FBW7_1
0.1667
p.G750V
DO49956
CESC
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.1667
p.T763K
DO228986
LICA
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.75
p.S762Y
DO229045
LICA
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.8231
p.G750R
DO50846
LICA
ICGC
VTTPGHS
DEG_SCF_FBW7_1
0.1667
p.P759S
SIDM00572
Gastric Carcinoma
GDSC
VTTPGHS
DEG_SCF_FBW7_1
0.6752
p.P759S
ACH-000911
Gastric Cancer
CCLE
VTTPGHS
DEG_SCF_FBW7_1
0.6752
p.P759S
NUGC-3
stomach
COSMIC
VTTPGHS
DEG_SCF_FBW7_1
0.6752
p.T758I
SIDM00750
Non-Small Cell Lung Carcinoma
GDSC
VTTPGHS
DEG_SCF_FBW7_1
0.8189
p.T758I
ACH-000869
Lung Cancer
CCLE
VTTPGHS
DEG_SCF_FBW7_1
0.8189
p.T758I
NCI-H1568
lung
COSMIC
VTTPGHS
DEG_SCF_FBW7_1
0.8189
Drug responses associated with MED13L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTPGHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q71F56
Mediator of RNA polymerase II transcription subunit 13-like
DEG_SCF_FBW7_1
756:762
VTTPGHS
FBXW7
0.9967
More...